RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 ARID3BQ8IVW6 561 aaPredicted RBP4.1□□□□□ -1.75
SDHB-204ENST00000475049 FOXRED2Q8IWF2 684 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 PCDH20Q8N6Y1 951 aaKnown RBP4.1□□□□□ -1.75
SDHB-204ENST00000475049 OR1J2Q8NGS2 313 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 HMGCLL1Q8TB92 370 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 HM13Q8TCT9 377 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 ELP5Q8TE02 316 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 NEUROG1Q92886 237 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 MTERF1Q99551 399 aaKnown RBP4.1□□□□□ -1.75
SDHB-204ENST00000475049 SIL1Q9H173 461 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 HRH4Q9H3N8 390 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 EPB41L5Q9HCM4 733 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 LTB4R2Q9NPC1 389 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 MRPL15Q9P015 296 aaKnown RBP4.1□□□□□ -1.75
SDHB-204ENST00000475049 WNT16Q9UBV4 365 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 NFS1Q9Y697 457 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 EVPLQ92817 2033 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 SYNJ2O15056 1496 aa4.1□□□□□ -1.75
SDHB-204ENST00000475049 EIF4G1Q04637 1599 aaKnown RBP4.1□□□□□ -1.75
SDHB-204ENST00000475049 IGLV5-52A0A0A0MRZ9 124 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 CPED1A4D0V7 1026 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 LACTBL1A8MY62 500 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 GAGE7O76087 117 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 ICAM1P05362 532 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 GAGE12FP0CL80 117 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 GAGE12GP0CL81 117 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 GAGE12IP0CL82 117 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 NRIP1P48552 1158 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 GPR143P51810 404 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 TAS2R38P59533 333 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 MRPS5P82675 430 aaKnown RBP4.09□□□□□ -1.75
SDHB-204ENST00000475049 PDE1BQ01064 536 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 SREBF2Q12772 1141 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 GAGE1Q13065 139 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 GAGE4Q13068 117 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 SOWAHCQ53LP3 525 aaPredicted RBP4.09□□□□□ -1.75
SDHB-204ENST00000475049 FAM69BQ5VUD6 431 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 FRG2Q64ET8 278 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 RHBDF2Q6PJF5 856 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 DLK2Q6UY11 383 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 CCNI2Q6ZMN8 369 aaPredicted RBP4.09□□□□□ -1.75
SDHB-204ENST00000475049 GPR180Q86V85 440 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 EPHX4Q8IUS5 362 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 SCYL3Q8IZE3 742 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 BEST3Q8N1M1 668 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 CLIP4Q8N3C7 705 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 OR2AK2Q8NG84 335 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 B4GALNT2Q8NHY0 566 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 WFIKKN2Q8TEU8 576 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 PHF21BQ96EK2 531 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 EGLN2Q96KS0 407 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 SMC6Q96SB8 1091 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 FIZ1Q96SL8 496 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 ZPBPQ9BS86 351 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 CENPOQ9BU64 300 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 TEX12Q9BXU0 123 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 DNAJC18Q9H819 358 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 MTMR10Q9NXD2 777 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 ARHGEF38Q9NXL2 777 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 UBA2Q9UBT2 640 aaPredicted RBP4.09□□□□□ -1.75
SDHB-204ENST00000475049 ACSL5Q9ULC5 683 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 KLHL20Q9Y2M5 609 aa4.09□□□□□ -1.75
SDHB-204ENST00000475049 PTRH2Q9Y3E5 179 aaKnown RBP4.09□□□□□ -1.75
SDHB-204ENST00000475049 MITFO75030 526 aaPredicted RBP4.08□□□□□ -1.76
SDHB-204ENST00000475049 KDM4BO94953 1096 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 CLDN14O95500 239 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 NGFRP08138 427 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 FCGR1AP12314 374 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 SRCP12931 536 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 AKR1B1P15121 316 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 ACADLP28330 430 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 KRT20P35900 424 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 NNMTP40261 264 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 RAD52P43351 418 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 RRP1P56182 461 aaKnown RBP4.08□□□□□ -1.76
SDHB-204ENST00000475049 PSMC6P62333 389 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 LTBQ06643 244 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 OASLQ15646 514 aaKnown RBP4.08□□□□□ -1.76
SDHB-204ENST00000475049 NTRK2Q16620 822 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 ZNF280DQ6N043 979 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 C16orf54Q6UWD8 224 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 TMCO3Q6UWJ1 677 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 APPL2Q8NEU8 664 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 GSDMBQ8TAX9 411 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 MAGEC3Q8TD91 643 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 THOC3Q96J01 351 aaKnown RBP4.08□□□□□ -1.76
SDHB-204ENST00000475049 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 SEMA3CQ99985 751 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 PDE7BQ9NP56 450 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 PAG1Q9NWQ8 432 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 MALT1Q9UDY8 824 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 SEC63Q9UGP8 760 aaKnown RBP4.08□□□□□ -1.76
SDHB-204ENST00000475049 DBNLQ9UJU6 430 aaKnown RBP4.08□□□□□ -1.76
SDHB-204ENST00000475049 FBXL2Q9UKC9 423 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 TTLL3Q9Y4R7 772 aa4.08□□□□□ -1.76
SDHB-204ENST00000475049 IGLV5-37A0A075B6J1 123 aa4.07□□□□□ -1.76
SDHB-204ENST00000475049 GOLGA6L9A6NEM1 432 aa4.07□□□□□ -1.76
SDHB-204ENST00000475049 MAP2K7O14733 419 aa4.07□□□□□ -1.76
SDHB-204ENST00000475049 SMAD9O15198 467 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms