RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 A0A1W2PQM1 296 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 GRID2IPA4D2P6 1211 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 RHPN2P1A8MT19 583 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 NTN3O00634 580 aaPredicted RBP13.52□□□□□ -0.25
SPCS1-204ENST00000474945 NUDT21O43809 227 aaKnown RBP13.52□□□□□ -0.25
SPCS1-204ENST00000474945 ECEL1O95672 775 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 RBMS1P29558 406 aaKnown RBP13.52□□□□□ -0.25
SPCS1-204ENST00000474945 EIF2S3P41091 472 aaKnown RBP13.52□□□□□ -0.25
SPCS1-204ENST00000474945 CETN2P41208 172 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 LSSP48449 732 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 INHBCP55103 352 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 WNT3AP56704 352 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 RWDD2BP57060 319 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 DCDC1P59894 354 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 COPS2P61201 443 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 LRP8Q14114 963 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 NOMO1Q15155 1222 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 OGFOD3Q6PK18 319 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 SLC25A41Q8N5S1 370 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 PATE1Q8WXA2 126 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 TADA1Q96BN2 335 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 NAF1Q96HR8 494 aaKnown RBP13.52□□□□□ -0.25
SPCS1-204ENST00000474945 ZNF578Q96N58 590 aaPredicted RBP13.52□□□□□ -0.25
SPCS1-204ENST00000474945 WDR24Q96S15 920 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 VAT1Q99536 393 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 FERMT1Q9BQL6 677 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 FSD1LQ9BXM9 530 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 OSBPL8Q9BZF1 889 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 STRADBQ9C0K7 418 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 MAGEE1Q9HCI5 957 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 THSD1Q9NS62 852 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 RAD18Q9NS91 495 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 VPS18Q9P253 973 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 ZNHIT2Q9UHR6 403 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 APPL1Q9UKG1 709 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 ATXN7L1Q9ULK2 861 aaPredicted RBP13.52□□□□□ -0.25
SPCS1-204ENST00000474945 PRKAB1Q9Y478 270 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 PLEKHM1Q9Y4G2 1056 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 PCDHA3Q9Y5H8 950 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 SPO11Q9Y5K1 396 aa13.52□□□□□ -0.25
SPCS1-204ENST00000474945 RP1P56715 2156 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 PMS2P1A4D2B8 440 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 STK10O94804 968 aaKnown RBP13.51□□□□□ -0.25
SPCS1-204ENST00000474945 FGF1P05230 155 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 ACP5P13686 325 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 PTPN7P35236 360 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 PPM1FP49593 454 aaPredicted RBP13.51□□□□□ -0.25
SPCS1-204ENST00000474945 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
SPCS1-204ENST00000474945 KIF5AQ12840 1032 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 AMZ1Q400G9 498 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 PYCR3Q53H96 274 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 ITPRIPL1Q6GPH6 555 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 KDELC1Q6UW63 502 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 PID1Q7Z2X4 250 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 PEX26Q7Z412 305 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 PHYKPLQ8IUZ5 450 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 TMEM139Q8IV31 216 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 LRRC57Q8N9N7 239 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 WDR36Q8NI36 951 aaKnown RBP13.51□□□□□ -0.25
SPCS1-204ENST00000474945 ACTL9Q8TC94 416 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 SCARF2Q96GP6 870 aaPredicted RBP13.51□□□□□ -0.25
SPCS1-204ENST00000474945 OXNAD1Q96HP4 312 aaPredicted RBP13.51□□□□□ -0.25
SPCS1-204ENST00000474945 SRPK1Q96SB4 655 aaKnown RBP13.51□□□□□ -0.25
SPCS1-204ENST00000474945 FAM118BQ9BPY3 351 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 HERPUD2Q9BSE4 406 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 ZSCAN5AQ9BUG6 496 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 GBA3Q9H227 469 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 C10orf88Q9H8K7 445 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 TRIM10Q9UDY6 481 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 ST14Q9Y5Y6 855 aa13.51□□□□□ -0.25
SPCS1-204ENST00000474945 ITPR1Q14643 2758 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 A0A1W2PNU3 283 aaPredicted RBP13.5□□□□□ -0.25
SPCS1-204ENST00000474945 AGRPO00253 132 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 AURKAO14965 403 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 ZW10O43264 779 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 DXOO77932 396 aaKnown RBP13.5□□□□□ -0.25
SPCS1-204ENST00000474945 PNLIPP16233 465 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 BPIP17213 487 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 ITPKBP27987 946 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 RBL1P28749 1068 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 ALDH4A1P30038 563 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 CHRNA4P43681 627 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
SPCS1-204ENST00000474945 MPP3Q13368 585 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 XRCC4Q13426 336 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 PLA2G4EQ3MJ16 856 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 SIRPB2Q5JXA9 342 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 PHF19Q5T6S3 580 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 AADACL2Q6P093 401 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 CRTC3Q6UUV7 619 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 CHST15Q7LFX5 561 aaPredicted RBP13.5□□□□□ -0.25
SPCS1-204ENST00000474945 GLT6D1Q7Z4J2 308 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 PDZD3Q86UT5 571 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
SPCS1-204ENST00000474945 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms