RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PTCD2Q8WV60 388 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 SEC14L1Q92503 715 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 CCDC97Q96F63 343 aaPredicted RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PPP1R2P1Q96PQ5 205 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ERP44Q9BS26 406 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 LRRC1Q9BTT6 524 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 RIOK2Q9BVS4 552 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 LGR4Q9BXB1 951 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 SEMA4CQ9C0C4 833 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PLAC1Q9HBJ0 212 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 BPIFA1Q9NP55 256 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 IL26Q9NPH9 171 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 GRHL1Q9NZI5 618 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 SLC2A6Q9UGQ3 507 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 FEZ2Q9UHY8 353 aaPredicted RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 KLF15Q9UIH9 416 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 DMTF1Q9Y222 760 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 HS3ST3A1Q9Y663 406 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ABCA12Q86UK0 2595 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ANKRD12Q6UB98 2062 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 DOPEY1Q5JWR5 2465 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 A0A1B0GTW7 788 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CCDC78A2IDD5 438 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 E7EVH7 732 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 GOLGA8MH3BSY2 632 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 TLR4O00206 839 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 DNALI1O14645 258 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 VILLO15195 856 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 PSMD3O43242 534 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SLC28A2O43868 658 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 BANF1O75531 89 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SLC4A1P02730 911 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 MGAT1P26572 445 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ARNTP27540 789 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CD38P28907 300 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 AKT2P31751 481 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NUDT1P36639 197 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ADCY8P40145 1251 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 EIF2S3P41091 472 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CTSKP43235 329 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CSRP3P50461 194 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ITGA8P53708 1063 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SESN2P58004 480 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NXPH1P58417 271 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CDK16Q00536 496 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SLC7A5Q01650 507 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ACVR1Q04771 509 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CKAP4Q07065 602 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 DPTQ07507 201 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CDH17Q12864 832 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 EIF2B5Q13144 721 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SGCGQ13326 291 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 PEX6Q13608 980 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 TUBB2AQ13885 445 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ARHGEF7Q14155 803 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 FZD2Q14332 565 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 POU6F1Q14863 301 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 LRRC14Q15048 493 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SHBQ15464 509 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 TAF1AQ15573 450 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 KHDC1Q4VXA5 237 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 FNBP1LQ5T0N5 605 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 IZUMO3Q5VZ72 239 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ALS2CLQ60I27 953 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CCDC70Q6NSX1 233 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 HIBCHQ6NVY1 386 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ESRP1Q6NXG1 681 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 PNCKQ6P2M8 343 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 LRRC8BQ6P9F7 803 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SLC23A3Q6PIS1 610 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ZDHHC24Q6UX98 284 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 KYAT3Q6YP21 454 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 Q6ZSR6 202 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SYDE1Q6ZW31 735 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ZNF765Q7L2R6 523 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 LINC00523Q86TU6 105 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SLCO6A1Q86UG4 719 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NLRP8Q86W28 1048 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 PPIL6Q8IXY8 311 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 RAVER1Q8IY67 606 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NRSN1Q8IZ57 195 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NDUFAF2Q8N183 169 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 MFSD2AQ8NA29 543 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 OR4K2Q8NGD2 314 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 OR13J1Q8NGT2 312 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 AP2M1Q96CW1 435 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NUS1Q96E22 293 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 DNAJC1Q96KC8 554 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SIGLEC10Q96LC7 697 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SERPINB12Q96P63 405 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 TUBB2BQ9BVA1 445 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 GTPBP2Q9BX10 602 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 CARD6Q9BX69 1037 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NUSAP1Q9BXS6 441 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 TEX101Q9BY14 249 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 GPR63Q9BZJ6 419 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 TRIM31Q9BZY9 425 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms