RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 KIF12Q96FN5 646 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 AURKBQ96GD4 344 aaPredicted RBP18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 NODALQ96S42 347 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 CLSTN3Q9BQT9 956 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 BTBD2Q9BX70 525 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PTGES3LE9PB15 166 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 AP3B1O00203 1094 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 MTSS1O43312 755 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 KRT75O95678 551 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 PCNAP12004 261 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 DNAJB2P25686 324 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 KCNC1P48547 511 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 FOXA1P55317 472 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 CD47Q08722 323 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 RPS6KA2Q15349 733 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 UNC50Q53HI1 259 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 PAGE3Q5JUK9 113 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 TTC23Q5W5X9 447 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 USP43Q70EL4 1123 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 ADCK1Q86TW2 530 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 TWIST2Q8WVJ9 160 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 C12orf42Q96LP6 360 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 MOV10Q9HCE1 1003 aaKnown RBP18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.53■□□□□ 0.563e-6■■■■□ 21.3
ECHDC1-214ENST00000474289 SLAMF8Q9P0V8 285 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 SLCO3A1Q9UIG8 710 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 NAALAD2Q9Y3Q0 740 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 A0A087WZ62 844 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 ILVBLA1L0T0 632 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 ZNF99A8MXY4 864 aaPredicted RBP18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 CAPN15O75808 1086 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 PRSS23O95084 383 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 SERPINB10P48595 397 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 TPI1P60174 286 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 VBP1P61758 197 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 BNIPLQ7Z465 357 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 PSMA8Q8TAA3 256 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 NT5C3BQ969T7 300 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 SDCCAG3Q96C92 435 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 L3HYPDHQ96EM0 354 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 NPY6RQ99463 290 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 AMBRA1Q9C0C7 1298 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 CCDC90BQ9GZT6 254 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 ALG9Q9H6U8 611 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 SP140LQ9H930 580 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 PRMT7Q9NVM4 692 aaPredicted RBP18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 PCNTO95613 3336 aa18.53■□□□□ 0.56
ECHDC1-214ENST00000474289 A0A1W2PP18 115 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 TTC34A8MYJ7 566 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 I6L893 689 aaPredicted RBP18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 MGEA5O60502 916 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 MT-CYBP00156 380 aaPredicted RBP18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 CDH1P12830 882 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 HGFP14210 728 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 ADIGQ0VDE8 80 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 SYPL2Q5VXT5 272 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 CATSPERGQ6ZRH7 1159 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 TEX37Q96LM6 180 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 MBOAT4Q96T53 435 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 CEP44Q9C0F1 390 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 SMURF2Q9HAU4 748 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 NECTIN3Q9NQS3 549 aa18.52■□□□□ 0.56
ECHDC1-214ENST00000474289 SLC1A7O00341 560 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 SNPHO15079 494 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 TBC1D4O60343 1298 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 GUCY1B2O75343 617 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 DAB1O75553 588 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 CHRNA1P02708 482 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 NTRK1P04629 796 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 ACADSBP45954 432 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 DIO3P55073 304 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 OR4D2P58180 307 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 FPGSQ05932 587 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 EFCAB12Q6NXP0 572 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 RNF19BQ6ZMZ0 732 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 GALNT13Q8IUC8 556 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 LGI2Q8N0V4 545 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 PNPLA1Q8N8W4 532 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 DYNC2LI1Q8TCX1 351 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 PHF10Q8WUB8 498 aaKnown RBP18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 FAR1Q8WVX9 515 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 TUBGCP3Q96CW5 907 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 VAT1Q99536 393 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 TBL1YQ9BQ87 522 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 CXCL16Q9H2A7 254 aa18.52■□□□□ 0.55
ECHDC1-214ENST00000474289 ASNA1O43681 348 aa18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 RFPL2O75678 378 aa18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 CDK14O94921 469 aa18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 EIF2DP41214 584 aaKnown RBP18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 ALDH7A1P49419 539 aaKnown RBP18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 PPP5CP53041 499 aa18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 IST1P53990 364 aa18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 EEFSECP57772 596 aaKnown RBP18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 EMX1Q04741 257 aaPredicted RBP18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 TNFAIP1Q13829 316 aa18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 SMUG1Q53HV7 270 aa18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 PPHLN1Q8NEY8 458 aaKnown RBP18.51■□□□□ 0.55
ECHDC1-214ENST00000474289 IPMKQ8NFU5 416 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms