RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FAM151BQ6UXP7 276 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 PRUNE1Q86TP1 453 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 TRIM74Q86UV6 250 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 GALNT13Q8IUC8 556 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 OR4K2Q8NGD2 314 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 BAHD1Q8TBE0 780 aaPredicted RBP13.65□□□□□ -0.22
USF1-205ENST00000473969 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
USF1-205ENST00000473969 CAPZA3Q96KX2 299 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 TTC25Q96NG3 672 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 GSDMCQ9BYG8 508 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 KCND1Q9NSA2 647 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 VPS18Q9P253 973 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 ZNHIT2Q9UHR6 403 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 APPL1Q9UKG1 709 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 GPR34Q9UPC5 381 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 SLC17A4Q9Y2C5 497 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 ARL5AQ9Y689 179 aa13.65□□□□□ -0.22
USF1-205ENST00000473969 FADS2P1A8MWK0 482 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 YY2O15391 372 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 PHF2O75151 1096 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 KRT14P02533 472 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 POLD2P49005 469 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 FNTAP49354 379 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 FOXC1Q12948 553 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 GTF2H3Q13889 308 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 POU6F1Q14863 301 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 TRIP13Q15645 432 aaPredicted RBP13.64□□□□□ -0.23
USF1-205ENST00000473969 DENND5AQ6IQ26 1287 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 FAM181AQ8N9Y4 354 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 OR52K1Q8NGK4 314 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 DTX3LQ8TDB6 740 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 GLYATL1Q969I3 302 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 COX14Q96I36 57 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 OR2M4Q96R27 311 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 ZCCHC2Q9C0B9 1178 aaKnown RBP13.64□□□□□ -0.23
USF1-205ENST00000473969 TMEM168Q9H0V1 697 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 RMI1Q9H9A7 625 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 TRIM39Q9HCM9 518 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 IL26Q9NPH9 171 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 TRNAU1APQ9NX07 287 aaKnown RBP13.64□□□□□ -0.23
USF1-205ENST00000473969 SMARCAL1Q9NZC9 954 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 GULP1Q9UBP9 304 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 RNF14Q9UBS8 474 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 CNOT6Q9ULM6 557 aaKnown RBP13.64□□□□□ -0.23
USF1-205ENST00000473969 PNMA8BQ9ULN7 279 aaPredicted RBP13.64□□□□□ -0.23
USF1-205ENST00000473969 CABIN1Q9Y6J0 2220 aa13.64□□□□□ -0.23
USF1-205ENST00000473969 VEGFDO43915 354 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 SUN1O94901 812 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 ECEL1O95672 775 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 ADRB1P08588 477 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 VPS41P49754 854 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 TMPRSS15P98073 1019 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 GPS1Q13098 491 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 ILKQ13418 452 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 PPP1R7Q15435 360 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 NR0B2Q15466 257 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 CHRNA6Q15825 494 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 CYP1B1Q16678 543 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 SKIDA1Q1XH10 827 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 PROX2Q3B8N5 592 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 C6orf132Q5T0Z8 1188 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 GLIS1Q8NBF1 620 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 FAM46DQ8NEK8 389 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 ZNF398Q8TD17 642 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 STYXQ8WUJ0 223 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 APOLD1Q96LR9 279 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 RUNDC3BQ96NL0 473 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 VPS35Q96QK1 796 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 CLPBQ9H078 707 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 OR2AG1Q9H205 316 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 DPEP2Q9H4A9 486 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 EIF2B3Q9NR50 452 aaKnown RBP13.63□□□□□ -0.23
USF1-205ENST00000473969 PIH1D1Q9NWS0 290 aaKnown RBP13.63□□□□□ -0.23
USF1-205ENST00000473969 SIRPGQ9P1W8 387 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 PCDHGA1Q9Y5H4 931 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
USF1-205ENST00000473969 HEATR9A2RTY3 570 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 CPED1A4D0V7 1026 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 GPR89AB7ZAQ6 455 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 RFPL3O75679 317 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 CDK14O94921 469 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 PRAMEF1O95521 474 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 CELA2BP08218 269 aaPredicted RBP13.62□□□□□ -0.23
USF1-205ENST00000473969 GPR89BP0CG08 455 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 CKMT1AP12532 417 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 ITGALP20701 1170 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 ACP1P24666 158 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 ADCY8P40145 1251 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 TERF1P54274 439 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 CDK16Q00536 496 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 DNAJC3Q13217 504 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 BIRC2Q13490 618 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 LRP8Q14114 963 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 ATP13A5Q4VNC0 1218 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 PYCR3Q53H96 274 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 LDLRAP1Q5SW96 308 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 TTC27Q6P3X3 843 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 CHST15Q7LFX5 561 aaPredicted RBP13.62□□□□□ -0.23
USF1-205ENST00000473969 C17orf53Q8N3J3 647 aaPredicted RBP13.62□□□□□ -0.23
USF1-205ENST00000473969 PNPLA1Q8N8W4 532 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms