RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CHRNA6Q15825 494 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 ATP13A5Q4VNC0 1218 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 LRRC8BQ6P9F7 803 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 MARK2Q7KZI7 788 aaKnown RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 PCGF5Q86SE9 256 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 JAMLQ86YT9 394 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 PPIL6Q8IXY8 311 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 ZNF548Q8NEK5 533 aaPredicted RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 PPHLN1Q8NEY8 458 aaKnown RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 KIF18AQ8NI77 898 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 STYXQ8WUJ0 223 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 OR1E3Q8WZA6 343 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 CPT1BQ92523 772 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 GLYATL1Q969I3 302 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 PDXPQ96GD0 296 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 COX14Q96I36 57 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 C19orf43Q9BQ61 176 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 FRMD8Q9BZ67 464 aaPredicted RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 TCEAL2Q9H3H9 227 aaPredicted RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 CARS2Q9HA77 564 aaKnown RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 UCKL1Q9NWZ5 548 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 FKBPLQ9UIM3 349 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 PNMA8BQ9ULN7 279 aaPredicted RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 DOLKQ9UPQ8 538 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 SLC30A1Q9Y6M5 507 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 DGKBQ9Y6T7 804 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 SCN8AQ9UQD0 1980 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 GOLGA8MH3BSY2 632 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 FFAR2O15552 330 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A9O60656 530 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 SRP72O76094 671 aaKnown RBP12.31□□□□□ -0.44
DDX56-209ENST00000473924 PRAMEF1O95521 474 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 CEACAM5P06731 702 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 ALPPL2P10696 532 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A6P19224 532 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A1P22309 533 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A4P22310 534 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A3P35503 534 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A5P35504 534 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 MAGEA6P43360 314 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 GNPDA1P46926 289 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 C1orf61Q13536 156 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 TCEA2Q15560 299 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 WHAMMP3Q1A5X7 153 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 PCID2Q5JVF3 399 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 ANKRD22Q5VYY1 191 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 DBX2Q6ZNG2 339 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 MAATS1Q7Z4T9 603 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 SLC25A45Q8N413 288 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 FSTL5Q8N475 847 aaPredicted RBP12.31□□□□□ -0.44
DDX56-209ENST00000473924 EID2Q8N6I1 236 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 DEFB124Q8NES8 71 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 ZNF398Q8TD17 642 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 DTX3LQ8TDB6 740 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 DNAJC1Q96KC8 554 aaKnown RBP12.31□□□□□ -0.44
DDX56-209ENST00000473924 TBATAQ96M53 351 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 TTC25Q96NG3 672 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 CAMK1GQ96NX5 476 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 VPS35Q96QK1 796 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 RANBP9Q96S59 729 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 LRRC61Q9BV99 259 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 IL22Q9GZX6 179 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 ASB8Q9H765 288 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 CAAP1Q9H8G2 361 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A7Q9HAW7 530 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A10Q9HAW8 530 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 UGT1A8Q9HAW9 530 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 ARFGAP3Q9NP61 516 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 NLE1Q9NVX2 485 aaPredicted RBP12.31□□□□□ -0.44
DDX56-209ENST00000473924 DLL3Q9NYJ7 618 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 VPS18Q9P253 973 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 ZNHIT2Q9UHR6 403 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 CNOT6Q9ULM6 557 aaKnown RBP12.31□□□□□ -0.44
DDX56-209ENST00000473924 SUFUQ9UMX1 484 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 SLC17A4Q9Y2C5 497 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 BTBD3Q9Y2F9 522 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 GPSM3Q9Y4H4 160 aa12.31□□□□□ -0.44
DDX56-209ENST00000473924 OAS3Q9Y6K5 1087 aaKnown RBP12.31□□□□□ -0.44
DDX56-209ENST00000473924 TDRD6O60522 2096 aaKnown RBP12.31□□□□□ -0.44
DDX56-209ENST00000473924 DCDC2BA2VCK2 349 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 MROH6A6NGR9 719 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 CCL22O00626 93 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 DNALI1O14645 258 aaPredicted RBP12.3□□□□□ -0.44
DDX56-209ENST00000473924 TM4SF5O14894 197 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TMEM63AO94886 807 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 IVLP07476 585 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 ANXA6P08133 673 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 ITGALP20701 1170 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 CSRP1P21291 193 aaKnown RBP12.3□□□□□ -0.44
DDX56-209ENST00000473924 MGAT1P26572 445 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 MC4RP32245 332 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 CRADDP78560 199 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TUBB2AQ13885 445 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 GTF2H3Q13889 308 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 ZRANB3Q5FWF4 1079 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 LDLRAP1Q5SW96 308 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 TSTD2Q5T7W7 516 aa12.3□□□□□ -0.44
DDX56-209ENST00000473924 IZUMO3Q5VZ72 239 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms