RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ADPRHL2Q9NX46 363 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 KLK13Q9UKR3 277 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 SLC39A10Q9ULF5 831 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 SCN11AQ9UI33 1791 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 TECPR2O15040 1411 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 PTPRUQ92729 1446 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 NSD3Q9BZ95 1437 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 C5P01031 1676 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 KIF1AQ12756 1690 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 LMO7Q8WWI1 1683 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 A0A1W2PP64 1363 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 EIF3AQ14152 1382 aaKnown RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PLEKHH1Q9ULM0 1364 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 AFDNP55196 1824 aaKnown RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 SOS1Q07889 1333 aaPredicted RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ARID4BQ4LE39 1312 aaPredicted RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ZBED9Q6R2W3 1325 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 LAMB4A4D0S4 1761 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 COL18A1P39060 1754 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 IGLV7-46A0A075B6I9 117 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 TYW5A2RUC4 315 aaKnown RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PMM2O15305 246 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 SLC25A17O43808 307 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PLA2G6O60733 806 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ATP2C2O75185 946 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 METTL18O95568 372 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 MYL3P08590 195 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 HSPA7P48741 367 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ARSFP54793 590 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ARHGEF6Q15052 776 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 MPEG1Q2M385 716 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 RUNDC3AQ59EK9 446 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 TECRLQ5HYJ1 363 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ATPAF1Q5TC12 328 aaPredicted RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 IZUMO3Q5VZ72 239 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 DOK6Q6PKX4 331 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ASB18Q6ZVZ8 466 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 TMTC1Q8IUR5 882 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 Q8N7P7 452 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 MUL1Q969V5 352 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 C18orf8Q96DM3 657 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 RIPOR3Q96MK2 946 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 POLR3GLQ9BT43 218 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 NAA15Q9BXJ9 866 aaKnown RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 FGFBP2Q9BYJ0 223 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 CLPBQ9H078 707 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 BRD8Q9H0E9 1235 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 SEPSECSQ9HD40 501 aaKnown RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PRDM8Q9NQV8 689 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 CNGB3Q9NQW8 809 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 CHPF2Q9P2E5 772 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 KLHL8Q9P2G9 620 aaPredicted RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 POLG2Q9UHN1 485 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 RARRES3Q9UL19 164 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 MOB4Q9Y3A3 225 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PCDHGB2Q9Y5G2 931 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PHLPP1O60346 1717 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PARP4Q9UKK3 1724 aaKnown RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 PTCH1Q13635 1447 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 SMG6Q86US8 1419 aaKnown RBP1.73□□□□□ -2.13
CCDC39-203ENST00000473854 NHSL1Q5SYE7 1610 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 ITGB4P16144 1822 aa1.73□□□□□ -2.13
CCDC39-203ENST00000473854 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 KTN1Q86UP2 1357 aaKnown RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ANKRD36BQ8N2N9 1353 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 TNRQ92752 1358 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 NPC1L1Q9UHC9 1359 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 GLI3P10071 1580 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 SRCAPQ6ZRS2 3230 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 CENPJQ9HC77 1338 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 NFAT5O94916 1531 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 PKD1L3Q7Z443 1732 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 TOGARAM1Q9Y4F4 1720 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ADAMTS7Q9UKP4 1686 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 CDK12Q9NYV4 1490 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 FAM90A18PA6NE21 464 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 FAM90A16PA6NEW6 464 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 FAM90A9PA6NNJ1 464 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 FAM90A5PA8MXJ8 464 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 APAF1O14727 1248 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ASNA1O43681 348 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 FAM90A15PP0C7V4 464 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 FAM90A14PP0C7W9 464 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 PCNAP12004 261 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ZNF23P17027 643 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ZNF8P17098 575 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 MTNR1AP48039 350 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 EIF4EBP2Q13542 120 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ENPP2Q13822 863 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 BYSLQ13895 437 aaKnown RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 IDI1Q13907 227 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 CAPRIN1Q14444 709 aaKnown RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ZNF234Q14588 700 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 SAFBQ15424 915 aaKnown RBP eCLIP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ZC2HC1CQ53FD0 456 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 NFRKBQ6P4R8 1299 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 GHDCQ8N2G8 530 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 SCCPDHQ8NBX0 429 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ZPLD1Q8TCW7 415 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms