RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
TPM3-216ENST00000473036 PHACTR4Q8IZ21 702 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 OXR1Q8N573 874 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 EID2Q8N6I1 236 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 ZNF548Q8NEK5 533 aaPredicted RBP13.04□□□□□ -0.32
TPM3-216ENST00000473036 BLOC1S5Q8TDH9 187 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
TPM3-216ENST00000473036 LRRC61Q9BV99 259 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 FSD1LQ9BXM9 530 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 FRMD8Q9BZ67 464 aaPredicted RBP13.04□□□□□ -0.32
TPM3-216ENST00000473036 GPR63Q9BZJ6 419 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 FAM83DQ9H4H8 585 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 WDR26Q9H7D7 661 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 CDC23Q9UJX2 597 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 TMEM98Q9Y2Y6 226 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 ZFC3H1O60293 1989 aaKnown RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 LY6G6EA0A0G2JKS1 128 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 RGSL1A5PLK6 1076 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 INPP4BO15327 924 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 SUN1O94901 812 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 DKK1O94907 266 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 MYCLP1P12525 358 aaPredicted RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 HMGCLP35914 325 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 COILP38432 576 aaPredicted RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 GPR1P46091 355 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 ARRB1P49407 418 aaPredicted RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 HK3P52790 923 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 SRP54P61011 504 aaKnown RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 SEMA5AQ13591 1074 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 PTK2BQ14289 1009 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 TRIP13Q15645 432 aaPredicted RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 COL28A1Q2UY09 1125 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 KHDC1Q4VXA5 237 aaKnown RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 ALS2CLQ60I27 953 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 TMPRSS7Q7RTY8 843 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 SLCO6A1Q86UG4 719 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 HID1Q8IV36 788 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 SFTPA2Q8IWL1 248 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 GALNT15Q8N3T1 639 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 OR56A4Q8NGH8 313 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 CCL4L1Q8NHW4 92 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 RHBDD1Q8TEB9 315 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 WDR92Q96MX6 357 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 RUNDC3BQ96NL0 473 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 IL26Q9NPH9 171 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 RAB6BQ9NRW1 208 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 PKD2L2Q9NZM6 624 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 NFKBIL1Q9UBC1 381 aaPredicted RBP13.03□□□□□ -0.32
TPM3-216ENST00000473036 SLC17A4Q9Y2C5 497 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 PLEKHM1Q9Y4G2 1056 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 U3KQA8 63 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 APC2O95996 2303 aa13.03□□□□□ -0.32
TPM3-216ENST00000473036 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
TPM3-216ENST00000473036 CACNB4O00305 520 aaPredicted RBP13.02□□□□□ -0.33
TPM3-216ENST00000473036 CCL22O00626 93 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 FFAR2O15552 330 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 FLRT2O43155 660 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 LDB2O43679 373 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 SIGLEC6O43699 453 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 GRK6P43250 576 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 DCDC1P59894 354 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 PPARDQ03181 441 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 CCDC70Q6NSX1 233 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 RD3Q7Z3Z2 195 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 GLT6D1Q7Z4J2 308 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 CEP112Q8N8E3 955 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 OR52K1Q8NGK4 314 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 CCHCR1Q8TD31 782 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 MAGOHBQ96A72 148 aaKnown RBP13.02□□□□□ -0.33
TPM3-216ENST00000473036 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.33
TPM3-216ENST00000473036 SCARF2Q96GP6 870 aaPredicted RBP13.02□□□□□ -0.33
TPM3-216ENST00000473036 CAPZA3Q96KX2 299 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 TRABDQ9H4I3 376 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 KCTD5Q9NXV2 234 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 KLQ9UEF7 1012 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 APOBEC3BQ9UH17 382 aaKnown RBP13.02□□□□□ -0.33
TPM3-216ENST00000473036 DGKBQ9Y6T7 804 aa13.02□□□□□ -0.33
TPM3-216ENST00000473036 RP1P56715 2156 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 KALRNO60229 2985 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 A0A087WV48 116 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 PRSS38A1L453 326 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 CCDC188H7C350 402 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 TK2O00142 265 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 CASC3O15234 703 aaKnown RBP13.01□□□□□ -0.33
TPM3-216ENST00000473036 YY2O15391 372 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 YKT6O15498 198 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 AQP9O43315 295 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 PHF2O75151 1096 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 FDFT1P37268 417 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 ZNF140P52738 457 aaPredicted RBP13.01□□□□□ -0.33
TPM3-216ENST00000473036 HNRNPKP61978 463 aaKnown RBP eCLIP13.01□□□□□ -0.33
TPM3-216ENST00000473036 XIAPP98170 497 aa13.01□□□□□ -0.33
TPM3-216ENST00000473036 DNAJC3Q13217 504 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms