RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PRAMEF33A0A0G2JMD5 474 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 IGHV5-10-1A0A0J9YXX1 117 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 FADS2P1A8MWK0 482 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 APOL1O14791 398 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 HGSO14964 777 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-203ENST00000472892 PRAMEF10O60809 474 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 ASMTLO95671 621 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 ZFXP17010 805 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-203ENST00000472892 SLC1A1P43005 524 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 FASLGP48023 281 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 CFHR1Q03591 330 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 AP1B1Q10567 949 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 PDAP1Q13442 181 aaKnown RBP15.17■□□□□ 0.02
VTI1A-203ENST00000472892 BIRC2Q13490 618 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 TGIF1Q15583 401 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-203ENST00000472892 USP7Q93009 1102 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 TADA1Q96BN2 335 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 EID2BQ96D98 161 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 IMP4Q96G21 291 aaKnown RBP15.17■□□□□ 0.02
VTI1A-203ENST00000472892 BRD8Q9H0E9 1235 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 RMI1Q9H9A7 625 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 AKAP7Q9P0M2 348 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-203ENST00000472892 ZNHIT2Q9UHR6 403 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
VTI1A-203ENST00000472892 PCYT1BQ9Y5K3 369 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-203ENST00000472892 IGHV1OR21-1A0A087WYE8 117 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 C9orf172C9J069 976 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 AGRPO00253 132 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 EML2O95834 649 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
VTI1A-203ENST00000472892 LIPCP11150 499 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 LIMK2P53671 638 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 TRA2AQ13595 282 aaKnown RBP eCLIP15.16■□□□□ 0.02
VTI1A-203ENST00000472892 FAM182AQ5T1J6 154 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 NKAIN2Q5VXU1 208 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 NPNTQ6UXI9 565 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 RHOT1Q8IXI2 618 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 SFRP1Q8N474 314 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 OR4D9Q8NGE8 314 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 AGAP3Q96P47 875 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 DPYSL5Q9BPU6 564 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 SLC25A51Q9H1U9 297 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 TSPY26PQ9H489 355 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 ZFYVE1Q9HBF4 777 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 MAGEE1Q9HCI5 957 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 DDX56Q9NY93 547 aaKnown RBP15.16■□□□□ 0.02
VTI1A-203ENST00000472892 KCNK4Q9NYG8 393 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 FOXJ2Q9P0K8 574 aa15.16■□□□□ 0.02
VTI1A-203ENST00000472892 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 TRBV23OR9-2A0A075B6M9 112 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 PPP1R12AO14974 1030 aaPredicted RBP15.15■□□□□ 0.02
VTI1A-203ENST00000472892 KRT1P04264 644 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 CCL4P13236 92 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 CD82P27701 267 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 MAPK10P53779 464 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 GPLD1P80108 840 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 TBX2Q13207 712 aaPredicted RBP15.15■□□□□ 0.02
VTI1A-203ENST00000472892 GALNT3Q14435 633 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 SLC14A2Q15849 920 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 TAZQ16635 292 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.15■□□□□ 0.02
VTI1A-203ENST00000472892 KIAA1614Q5VZ46 1190 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 TMEM71Q6P5X7 295 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 IYDQ6PHW0 289 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 CHST15Q7LFX5 561 aaPredicted RBP15.15■□□□□ 0.02
VTI1A-203ENST00000472892 LYSMD3Q7Z3D4 306 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 TMC3Q7Z5M5 1100 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 ZFAND4Q86XD8 727 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 DTX1Q86Y01 620 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 RFX6Q8HWS3 928 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 CNGA4Q8IV77 575 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 RCBTB1Q8NDN9 531 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 SLC37A2Q8TED4 501 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 CCDC74BQ96LY2 380 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 CEP41Q9BYV8 373 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 SEPT10Q9P0V9 454 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 PDP2Q9P2J9 529 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
VTI1A-203ENST00000472892 A6NCN8 305 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.14■□□□□ 0.01
VTI1A-203ENST00000472892 NUAK1O60285 661 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 THRAP10827 490 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 FGF3P11487 239 aaPredicted RBP15.14■□□□□ 0.01
VTI1A-203ENST00000472892 COMTP21964 271 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 CSF2RBP32927 897 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 NR2C2P49116 596 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 CDK18Q07002 472 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 TEX44Q53QW1 395 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 TMEM164Q5U3C3 297 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 MFSD7Q6UXD7 560 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 BZW1Q7L1Q6 419 aaKnown RBP15.14■□□□□ 0.01
VTI1A-203ENST00000472892 KDELC2Q7Z4H8 507 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 GPR26Q8NDV2 337 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 TAAR9Q96RI9 348 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 SLC38A3Q99624 504 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 CARD9Q9H257 536 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 GLOD4Q9HC38 313 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 SARS2Q9NP81 518 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms