RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 FAM149AA5PLN7 773 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ANTXRLA6NF34 631 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 A6NNZ2 444 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 KCNU1A8MYU2 1149 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 M0QYT0 321 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 MCF2LO15068 1137 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ZW10O43264 779 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 MSI1O43347 362 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 SUV39H1O43463 412 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 HSF2BPO75031 334 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 CLDN11O75508 207 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 MOCS2O96007 188 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 CKMT1AP12532 417 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 HNRNPA2B1P22626 353 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 HSD3B2P26439 372 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 CD70P32970 193 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 GDF5P43026 501 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 RABIFP47224 123 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 LSSP48449 732 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 MASP1P48740 699 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 PGFP49763 221 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 BLKP51451 505 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 HMGA2P52926 109 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 YWHAZP63104 245 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 RPS21P63220 83 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 CXADRP78310 365 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 DGCR2P98153 550 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 CDK17Q00537 523 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 IL9RQ01113 521 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ZNF177Q13360 481 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 PTK2BQ14289 1009 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 PDCD1Q15116 288 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 CNGA2Q16280 664 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 CCDC40Q4G0X9 1142 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ZCWPW2Q504Y3 356 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 C9orf64Q5T6V5 341 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ZNF658Q5TYW1 1059 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 RETSATQ6NUM9 610 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 LRRC31Q6UY01 552 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 KYAT3Q6YP21 454 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 ZNF783Q6ZMS7 281 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 KRBA2Q6ZNG9 492 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 LHFPL2Q6ZUX7 228 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ADGRE4PQ86SQ3 457 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 SETD3Q86TU7 594 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 PPM1KQ8N3J5 372 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 EID2Q8N6I1 236 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ZNF366Q8N895 744 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 DENND6BQ8NEG7 585 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 OR6C4Q8NGE1 309 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ATL2Q8NHH9 583 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 DQX1Q8TE96 717 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 SLC35F5Q8WV83 523 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 SNRNP27Q8WVK2 155 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 WBP2Q969T9 261 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 RAB7BQ96AH8 199 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 TMEM159Q96B96 161 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ERLEC1Q96DZ1 483 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 SCYL1Q96KG9 808 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 TBATAQ96M53 351 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 PRICKLE1Q96MT3 831 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 RPRD1AQ96P16 312 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 OR14A2Q96R54 314 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 GPHA2Q96T91 129 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 STRADBQ9C0K7 418 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 OR10A2Q9H208 303 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 THAP9Q9H5L6 903 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 RETREG1Q9H6L5 497 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 SYNCQ9H7C4 482 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 POLR1BQ9H9Y6 1135 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ASNSD1Q9NWL6 643 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 CYTH4Q9UIA0 394 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 VPS28Q9UK41 221 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 RCOR1Q9UKL0 485 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 STAP1Q9ULZ2 295 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 MAPRE3Q9UPY8 281 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 HPSEQ9Y251 543 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 HS3ST2Q9Y278 367 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 PCDHGA8Q9Y5G5 932 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 RAI2Q9Y5P3 530 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 HEMK1Q9Y5R4 338 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 HELZ2Q9BYK8 2649 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 ATMQ13315 3056 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 A0A1B0GVL5 298 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PMS2P1A4D2B8 440 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ZSCAN5CA6NGD5 496 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 C10orf142B7Z368 130 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 NPIPB8E9PQR5 432 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 KPNA3O00505 521 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 NEMP1O14524 444 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 FPGTO14772 594 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 TPP1O14773 563 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SCAMP1O15126 338 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CDC14BO60729 498 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SEC24DO94855 1032 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 FKBP9O95302 570 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 TRUB2O95900 331 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 MT-CO3P00414 261 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 F9P00740 461 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms