RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 NKAPQ8N5F7 415 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 HJURPQ8NCD3 748 aaPredicted RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RTFDC1Q9BY42 306 aaPredicted RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 EXD2Q9NVH0 621 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NUP50Q9UKX7 468 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RPTORQ8N122 1335 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 H3BSH0 61 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 E2F3O00716 465 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TOP3AQ13472 1001 aaPredicted RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 IL18Q14116 193 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PARP6Q2NL67 630 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZZZ3Q8IYH5 903 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR52J3Q8NH60 311 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 COLEC10Q9Y6Z7 277 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ACLYP53396 1101 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 UBAP2LQ14157 1087 aaKnown RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CYP27C1Q4G0S4 372 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DEFB119Q8N690 84 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C11orf24Q96F05 449 aaPredicted RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TSSK3Q96PN8 268 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ASB2Q96Q27 587 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PAPSS1O43252 624 aaPredicted RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PLGLB1Q02325 96 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CHST15Q7LFX5 561 aaPredicted RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TMC3Q7Z5M5 1100 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GPR180Q86V85 440 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GPC2Q8N158 579 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KCTD4Q8WVF5 259 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 COQ8BQ96D53 544 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 POU2F3Q9UKI9 436 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PCDHGA6Q9Y5G7 932 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CPED1A4D0V7 1026 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LAMP2P13473 410 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ITGA2P17301 1181 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CCNOP22674 350 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PTENP60484 403 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SEMG2Q02383 582 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 HSF2Q03933 536 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BEND4Q6ZU67 534 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 HERVK_113Q902F9 699 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CERS2Q96G23 380 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZNF638Q14966 1978 aaKnown RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 H3BM21 787 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MTHFD1P11586 935 aaKnown RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 EFNA1P20827 205 aaPredicted RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FLT3LGP49771 235 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC25A3Q00325 362 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC8B1Q6J4K2 584 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KIAA0895Q8NCT3 520 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ARHGAP20Q9P2F6 1191 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM205AQ6ZU69 1335 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQ67 120 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NPEPPSL1A6NEC2 478 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TRAPPC6AO75865 159 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CSN2P05814 226 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FUT4P22083 530 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KELP23276 732 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TXNL4AP83876 142 aaKnown RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZFP1Q6P2D0 407 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GPR142Q7Z601 462 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM83AQ86UY5 434 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC22A15Q8IZD6 547 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 COPS8Q99627 209 aa13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LRRC72A6NJI9 287 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 E7ENQ6 273 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LOC110117498-PIK3R3F6TDL0 507 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ICAM3P32942 547 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TNFSF9P41273 254 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BRCC3P46736 316 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LRP8Q14114 963 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 QPRTQ15274 297 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM35AQ86V20 835 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR7D4Q8NG98 312 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PIK3R3Q92569 461 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MTMR8Q96EF0 704 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ELAC1Q9H777 363 aaKnown RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BRD7Q9NPI1 651 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NDUFA13Q9P0J0 144 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CARD8Q9Y2G2 431 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DHRS7Q9Y394 339 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 EML1O00423 815 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MDM4O15151 490 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CDK14O94921 469 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NELFEP18615 380 aaKnown RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RIPK1Q13546 671 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SULT1C3Q6IMI6 304 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LRRC69Q6ZNQ3 347 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ELOA2Q8IYF1 753 aaPredicted RBP13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PLEKHG4BQ96PX9 1271 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TBCBQ99426 244 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ADAM28Q9UKQ2 775 aa13.18□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms