RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 LRRC14Q15048 493 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 IRF4Q15306 451 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 SETMARQ53H47 684 aaPredicted RBP19.07■□□□□ 0.64
PSPC1-203ENST00000471658 RAET1GQ6H3X3 334 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 WDR5BQ86VZ2 330 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 SERPINA9Q86WD7 417 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 CILP2Q8IUL8 1156 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 CNTN4Q8IWV2 1026 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 GPR150Q8NGU9 434 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 NAT14Q8WUY8 206 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 FUBP1Q96AE4 644 aaKnown RBP19.07■□□□□ 0.64
PSPC1-203ENST00000471658 CENPTQ96BT3 561 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 BIRC7Q96CA5 298 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 FAM167BQ9BTA0 163 aa19.07■□□□□ 0.64
PSPC1-203ENST00000471658 CNOT6Q9ULM6 557 aaKnown RBP19.07■□□□□ 0.64
PSPC1-203ENST00000471658 EML5Q05BV3 1969 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 TRBV5-4A0A0C4DH59 114 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 LATO43561 262 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 S1PR4O95977 384 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 AHSGP02765 367 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 GPR1P46091 355 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 CCR5P51681 352 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 STAT4Q14765 748 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 ZNF648Q5T619 568 aaPredicted RBP19.06■□□□□ 0.64
PSPC1-203ENST00000471658 MRNIPQ6NTE8 343 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 PNCKQ6P2M8 343 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 MARK2Q7KZI7 788 aaKnown RBP19.06■□□□□ 0.64
PSPC1-203ENST00000471658 C2CD4AQ8NCU7 369 aaPredicted RBP19.06■□□□□ 0.64
PSPC1-203ENST00000471658 EPS8L3Q8TE67 593 aaKnown RBP19.06■□□□□ 0.64
PSPC1-203ENST00000471658 CDKL2Q92772 493 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 LENG8Q96PV6 779 aaPredicted RBP19.06■□□□□ 0.64
PSPC1-203ENST00000471658 ZSCAN5AQ9BUG6 496 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 CDH19Q9H159 772 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 CRLS1Q9UJA2 301 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 PLXNA2O75051 1894 aa19.06■□□□□ 0.64
PSPC1-203ENST00000471658 ZNF106Q9H2Y7 1883 aaKnown RBP19.05■□□□□ 0.64
PSPC1-203ENST00000471658 CCDC163A0A0D9SF12 145 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 SMIM23A6NLE4 172 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 AGAP14A8MT82 685 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 OR1I1O60431 355 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 SASH3O75995 380 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 HAUS5O94927 633 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 IGFALSP35858 605 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 SLCO1A2P46721 670 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 CLDN2P57739 230 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 RPL6Q02878 288 aaKnown RBP19.05■□□□□ 0.64
PSPC1-203ENST00000471658 INPP5AQ14642 412 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 DBN1Q16643 649 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 KLHL38Q2WGJ6 581 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 ZNF449Q6P9G9 518 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 HDXQ7Z353 690 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 STRA8Q7Z7C7 330 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 NLRP8Q86W28 1048 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 LONP2Q86WA8 852 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 LRRC6Q86X45 466 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 CALML6Q8TD86 181 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 ASB12Q8WXK4 309 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 SPACA7Q96KW9 195 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 PAFAH2Q99487 392 aa19.05■□□□□ 0.64
PSPC1-203ENST00000471658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 MAP3K13O43283 966 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 MTX2O75431 263 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 IFFO1Q0D2I5 559 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 ITGA9Q13797 1035 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 GPR33Q49SQ1 333 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 KHDC1Q4VXA5 237 aaKnown RBP19.04■□□□□ 0.64
PSPC1-203ENST00000471658 CNSTQ6PJW8 725 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 PACS1Q6VY07 963 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 SDCCAG8Q86SQ7 713 aaPredicted RBP19.04■□□□□ 0.64
PSPC1-203ENST00000471658 TRIM74Q86UV6 250 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 SLC41A1Q8IVJ1 513 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 TMEFF1Q8IYR6 380 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 NXPE1Q8N323 547 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 DTX3LQ8TDB6 740 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 DCAKDQ8WVC6 231 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 BTN2A2Q8WVV5 523 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 SLC44A1Q8WWI5 657 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 CCDC77Q9BR77 488 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 BOCQ9BWV1 1114 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 CTNNAL1Q9UBT7 734 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 FBXO4Q9UKT5 387 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.04■□□□□ 0.64
PSPC1-203ENST00000471658 SLCO1B1Q9Y6L6 691 aa19.04■□□□□ 0.64
PSPC1-203ENST00000471658 TLDC2A0PJX2 215 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 POM121BA6NF01 834 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 METTL12A8MUP2 240 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 ACRV1P26436 265 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 PMLP29590 882 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 MSH2P43246 934 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 ZNF844Q08AG5 666 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 TYSND1Q2T9J0 566 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 GPRC6AQ5T6X5 926 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 SLC36A4Q6YBV0 504 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 SNX19Q92543 992 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 GLYATL1Q969I3 302 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 ATXN7L3BQ96GX2 97 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 BMFQ96LC9 184 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 ORAI3Q9BRQ5 295 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 LGR4Q9BXB1 951 aa19.03■□□□□ 0.64
PSPC1-203ENST00000471658 CRYL1Q9Y2S2 319 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms