RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 NRROSQ86YC3 692 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 GALNT13Q8IUC8 556 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 SFTPA2Q8IWL1 248 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 MCOLN2Q8IZK6 566 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 APOBEC4Q8WW27 367 aaKnown RBP9.08□□□□□ -0.96
CPSF4-211ENST00000471455 NUDCD1Q96RS6 583 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 SNRNP25Q9BV90 132 aaKnown RBP9.08□□□□□ -0.96
CPSF4-211ENST00000471455 EPN3Q9H201 632 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 EPB41L1Q9H4G0 881 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 ZNF358Q9NW07 568 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 GPATCH2LQ9NWQ4 482 aa9.08□□□□□ -0.96
CPSF4-211ENST00000471455 SPTAN1Q13813 2472 aaKnown RBP9.08□□□□□ -0.96
CPSF4-211ENST00000471455 SPTBN1Q01082 2364 aaKnown RBP9.07□□□□□ -0.96
CPSF4-211ENST00000471455 GP1BBP13224 206 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 GM2AP17900 193 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 CA4P22748 312 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 CSF2RBP32927 897 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 SERPINB6P35237 376 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ARL4AP40617 200 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ETV3P41162 512 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 KLK7P49862 253 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ABHD18Q0P651 414 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 NCAPHQ15003 741 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 CRTC2Q53ET0 693 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-211ENST00000471455 LACTB2Q53H82 288 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-211ENST00000471455 CDKAL1Q5VV42 579 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 NKAIN2Q5VXU1 208 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ANKS6Q68DC2 871 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 DOK6Q6PKX4 331 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 WDR74Q6RFH5 385 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-211ENST00000471455 TMCO3Q6UWJ1 677 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ADAMTSL4Q6UY14 1074 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ZNF765Q7L2R6 523 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 KDELC2Q7Z4H8 507 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ARHGAP12Q8IWW6 846 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 NAGSQ8N159 534 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 ATPAF2Q8N5M1 289 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 FNIP1Q8TF40 1166 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 AP2M1Q96CW1 435 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 SCRN2Q96FV2 425 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 MCCC1Q96RQ3 725 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-211ENST00000471455 MGME1Q9BQP7 344 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-211ENST00000471455 PCSK1NQ9UHG2 260 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 PILRAQ9UKJ1 303 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 SIK3Q9Y2K2 1263 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 SCINQ9Y6U3 715 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 FLNCQ14315 2725 aa9.07□□□□□ -0.96
CPSF4-211ENST00000471455 BOD1L1Q8NFC6 3051 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 RP1L1Q8IWN7 2480 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-211ENST00000471455 LGALS16A8MUM7 142 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 EPHB6O15197 1021 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PPM1DO15297 605 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PGLSO95336 258 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PRKAR1AP10644 381 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 ZNF30P17039 623 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 TCN2P20062 427 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 TNFAIP3P21580 790 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 LHCGRP22888 699 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 MMP13P45452 471 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 EPHB1P54762 984 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 CDH6P55285 790 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 MC2RQ01718 297 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SLC10A7Q0GE19 358 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 MAMLD1Q13495 774 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 DPYSQ14117 519 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 MAP7Q14244 749 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SKIDA1Q1XH10 827 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 TMEM214Q6NUQ4 689 aaKnown RBP9.06□□□□□ -0.96
CPSF4-211ENST00000471455 CYB5D1Q6P9G0 228 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 Q6ZVL8 140 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 HSD11B1LQ7Z5J1 315 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SLC9B2Q86UD5 537 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 RAVER1Q8IY67 606 aaKnown RBP9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PELI3Q8N2H9 469 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SFRP1Q8N474 314 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 FAM26EQ8N5C1 309 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 ESX1Q8N693 406 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 NPWQ8N729 165 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SLC37A2Q8TED4 501 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PATE1Q8WXA2 126 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 STARD8Q92502 1023 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PMEPA1Q969W9 287 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 RTP4Q96DX8 246 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 TRIM11Q96F44 468 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SCARF2Q96GP6 870 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-211ENST00000471455 HERPUD2Q9BSE4 406 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 SARS2Q9NP81 518 aaKnown RBP9.06□□□□□ -0.96
CPSF4-211ENST00000471455 FBXO8Q9NRD0 319 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 VPS18Q9P253 973 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PDP2Q9P2J9 529 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 KCTD3Q9Y597 815 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 PCDHGC4Q9Y5F7 938 aa9.06□□□□□ -0.96
CPSF4-211ENST00000471455 KIR2DS5A0A0G2JLQ3 304 aa9.05□□□□□ -0.96
CPSF4-211ENST00000471455 A0A0G2JNG1 304 aa9.05□□□□□ -0.96
CPSF4-211ENST00000471455 A0A1B0GTH6 734 aa9.05□□□□□ -0.96
CPSF4-211ENST00000471455 NPIPB15A6NHN6 443 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-211ENST00000471455 OR5K4A6NMS3 321 aa9.05□□□□□ -0.96
CPSF4-211ENST00000471455 MKRN2OSH3BPM6 223 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms