RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SUDS3Q9H7L9 328 aaPredicted RBP17.42■□□□□ 0.38
HSPG2-208ENST00000471322 THAP1Q9NVV9 213 aa17.42■□□□□ 0.38
HSPG2-208ENST00000471322 RUVBL2Q9Y230 463 aaKnown RBP17.42■□□□□ 0.38
HSPG2-208ENST00000471322 PKP3Q9Y446 797 aa17.42■□□□□ 0.38
HSPG2-208ENST00000471322 USH1CQ9Y6N9 552 aa17.42■□□□□ 0.38
HSPG2-208ENST00000471322 H7C0S8 307 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 AURKAO14965 403 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 BUD23O43709 281 aaKnown RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 H2AFYO75367 372 aaKnown RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 KLHL2O95198 593 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 POLR2EP19388 210 aaKnown RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 CTSOP43234 321 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 VASPP50552 380 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 IRX4P78413 519 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 BST1Q10588 318 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 ZNF234Q14588 700 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 CRY1Q16526 586 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 RNF187Q5TA31 235 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 HECTD2Q5U5R9 776 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 C22orf39Q6P5X5 142 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 TRPM8Q7Z2W7 1104 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 TBC1D1Q86TI0 1168 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 CAMK1DQ8IU85 385 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 PAF1Q8N7H5 531 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 PHOX2BQ99453 314 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 GPR63Q9BZJ6 419 aa17.41■□□□□ 0.38
HSPG2-208ENST00000471322 MARCH4Q9P2E8 410 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 HECAQ9UBI9 543 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 ZFHX2Q9C0A1 2572 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-208ENST00000471322 CCL22O00626 93 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 PHGDHO43175 533 aaKnown RBP17.4■□□□□ 0.38
HSPG2-208ENST00000471322 SNNO75324 88 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-208ENST00000471322 SERPINE1P05121 402 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 TDGF1P13385 188 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 HLA-EP13747 358 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 HOXB2P14652 356 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 NTSR1P30989 418 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 HMGCLP35914 325 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 NNMTP40261 264 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 IL12RB1P42701 662 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 FNTBP49356 437 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 STC1P52823 247 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 IRF9Q00978 393 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 PTPRCAPQ14761 206 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 PCLAFQ15004 111 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 CARD16Q5EG05 197 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 AARS2Q5JTZ9 985 aaKnown RBP17.4■□□□□ 0.38
HSPG2-208ENST00000471322 ANO7Q6IWH7 933 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 KIAA1211LQ6NV74 962 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 MAMSTRQ6ZN01 415 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 CRLF3Q8IUI8 442 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 CEP97Q8IW35 865 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 WFIKKN2Q8TEU8 576 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 RPL10LQ96L21 214 aaKnown RBP17.4■□□□□ 0.38
HSPG2-208ENST00000471322 ZNF641Q96N77 438 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-208ENST00000471322 TNKS2Q9H2K2 1166 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 FBXO4Q9UKT5 387 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 ZNF711Q9Y462 761 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 STON1Q9Y6Q2 735 aa17.4■□□□□ 0.38
HSPG2-208ENST00000471322 A0A0J9YYE9 177 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 OR51F1A6NGY5 319 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 TRBC1P01850 177 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 OCRLQ01968 901 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 SRSF5Q13243 272 aaKnown RBP17.39■□□□□ 0.38
HSPG2-208ENST00000471322 FAM83EQ2M2I3 478 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 ACCSLQ4AC99 568 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 FNDC3BQ53EP0 1204 aaKnown RBP17.39■□□□□ 0.38
HSPG2-208ENST00000471322 ZNF789Q5FWF6 425 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 AGAP9Q5VTM2 703 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 C10orf107Q8IVU9 208 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 UCMAQ8WVF2 138 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 CCT6BQ92526 530 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 POPDC3Q9HBV1 291 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 ZNF358Q9NW07 568 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 IL17CQ9P0M4 197 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 PLA2G4CQ9UP65 541 aa17.39■□□□□ 0.38
HSPG2-208ENST00000471322 TCRBV21S2A2A0A5A6 115 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 NDUFS3O75489 264 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 DCTN3O75935 186 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 ASLP04424 464 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 MYL2P10916 166 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 RALBP11234 206 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 KCNA4P22459 653 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 RECQLP46063 649 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-208ENST00000471322 TTPAP49638 278 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 STK19P49842 368 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-208ENST00000471322 NHLH1Q02575 133 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 ASPHQ12797 758 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 SF3A3Q12874 501 aaKnown RBP eCLIP17.39■□□□□ 0.37
HSPG2-208ENST00000471322 EIF4HQ15056 248 aaKnown RBP17.39■□□□□ 0.37
HSPG2-208ENST00000471322 PTPRNQ16849 979 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 EOGTQ5NDL2 527 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 SDE2Q6IQ49 451 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 KLC3Q6P597 504 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 SERPINA13PQ6UXR4 307 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 CENPLQ8N0S6 344 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-208ENST00000471322 TSTD1Q8NFU3 115 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 OR6K2Q8NGY2 324 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 HMGB4Q8WW32 186 aa17.39■□□□□ 0.37
HSPG2-208ENST00000471322 SCYL1Q96KG9 808 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms