RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 KELP23276 732 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 TRIM23P36406 574 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 ETV5P41161 510 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 CSNK1DP48730 415 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 NDST2P52849 883 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 OTUD4Q01804 1114 aaKnown RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 GBE1Q04446 702 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 C2orf54Q08AI8 447 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 RALGDSQ12967 914 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 SRSF6Q13247 344 aaKnown RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 XRCC4Q13426 336 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 TCEA2Q15560 299 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 CLPPQ16740 277 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 MANEAQ5SRI9 462 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 CFAP58Q5T655 872 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 ATG14Q6ZNE5 492 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 TAF8Q7Z7C8 310 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 C17orf82Q86X59 251 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 LRRC49Q8IUZ0 686 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 PLA2G15Q8NCC3 412 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 SLC35B2Q8TB61 432 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 MAGOHBQ96A72 148 aaKnown RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 FUBP1Q96AE4 644 aaKnown RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 HAUS1Q96CS2 278 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 ECHDC3Q96DC8 303 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 BRD8Q9H0E9 1235 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 ETNK2Q9NVF9 386 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 DTLQ9NZJ0 730 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 FOXJ2Q9P0K8 574 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 LRIT1Q9P2V4 623 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 FEZ2Q9UHY8 353 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 R3HDM2Q9Y2K5 976 aaKnown RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 HEY1Q9Y5J3 304 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 RNF215Q9Y6U7 377 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 UBR5O95071 2799 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-206ENST00000471037 C9orf172C9J069 976 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 LIASO43766 372 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 PRAMEF11O60813 436 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 CPNE6O95741 557 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 GM2AP17900 193 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 SERPINA4P29622 427 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 EIF3EP60228 445 aaKnown RBP9.05□□□□□ -0.96
SF3A1-206ENST00000471037 B4GALNT1Q00973 533 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 GALNT2Q10471 571 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 ARHGEF7Q14155 803 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 NR1D2Q14995 579 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 PDK1Q15118 436 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 AFMIDQ63HM1 303 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 CCDC70Q6NSX1 233 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 NPNTQ6UXI9 565 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 LIPIQ6XZB0 460 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 DPPA4Q7L190 304 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 TMPRSS9Q7Z410 1059 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 ZNF438Q7Z4V0 828 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 VASH2Q86V25 355 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 ZFAND4Q86XD8 727 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 CAMK1DQ8IU85 385 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 CDKL3Q8IVW4 592 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-206ENST00000471037 SFTPA2Q8IWL1 248 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 MMGT1Q8N4V1 131 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 NPWQ8N729 165 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 Q8N9G6 341 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-206ENST00000471037 ZSCAN1Q8NBB4 408 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 FAM46DQ8NEK8 389 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 GRK7Q8WTQ7 553 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 C1orf54Q8WWF1 131 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 ATG4AQ8WYN0 398 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 USP7Q93009 1102 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 OLFM3Q96PB7 478 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 FERMT1Q9BQL6 677 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 TRIM4Q9C037 500 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 DDX47Q9H0S4 455 aaKnown RBP9.05□□□□□ -0.96
SF3A1-206ENST00000471037 TMEM168Q9H0V1 697 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 ATP13A3Q9H7F0 1226 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 MRPL40Q9NQ50 206 aaKnown RBP9.05□□□□□ -0.96
SF3A1-206ENST00000471037 WDR70Q9NW82 654 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 PCYOX1Q9UHG3 505 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 DRG1Q9Y295 367 aaKnown RBP9.05□□□□□ -0.96
SF3A1-206ENST00000471037 PCDHB11Q9Y5F2 797 aa9.05□□□□□ -0.96
SF3A1-206ENST00000471037 ANKRD36A6QL64 1941 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 NAV2Q8IVL1 2488 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 ARHGAP42A6NI28 874 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 EFCAB8A8MWE9 144 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 B4DGG1 531 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 H7C0C1 242 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 J3KR12 359 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 TRAFD1O14545 582 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 HGSO14964 777 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 MTSS1O43312 755 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 PPFIA2O75334 1257 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 GAS8O95995 478 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 PRKCGP05129 697 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 ELFN1P0C7U0 828 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 FAM87AP0C7U9 286 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 RBP3P10745 1247 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 CCNB1P14635 433 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 WT1P19544 449 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 COILP38432 576 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms