RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 FAXCQ5TGI0 409 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 NKAIN2Q5VXU1 208 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 HMBOX1Q6NT76 420 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 KLHDC10Q6PID8 442 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 MMS22LQ6ZRQ5 1243 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 CIR1Q86X95 450 aaPredicted RBP6.89□□□□□ -1.31
LDHB-206ENST00000470985 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 ZMIZ2Q8NF64 920 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 OR6C4Q8NGE1 309 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 TBATAQ96M53 351 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 TEFMQ96QE5 360 aaKnown RBP6.89□□□□□ -1.31
LDHB-206ENST00000470985 DHRS4Q9BTZ2 278 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 RNF26Q9BY78 433 aaPredicted RBP6.89□□□□□ -1.31
LDHB-206ENST00000470985 SLC13A1Q9BZW2 595 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 SLC6A20Q9NP91 592 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 SH3GLB2Q9NR46 395 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 LRIT1Q9P2V4 623 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 SIX4Q9UIU6 781 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 ST6GALNAC2Q9UJ37 374 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 RASAL2Q9UJF2 1139 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 KCNJ14Q9UNX9 436 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 ERVW-1Q9UQF0 538 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 PLEKHA6Q9Y2H5 1048 aa6.89□□□□□ -1.31
LDHB-206ENST00000470985 MDC1Q14676 2089 aaKnown RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 PP2D1A8MPX8 630 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 RNF103O00237 685 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 PPP1R12AO14974 1030 aaPredicted RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 DLX3O60479 287 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 CDC45O75419 566 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 BEST1O76090 585 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 PAK4O96013 591 aaPredicted RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 WARSP23381 471 aaKnown RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 CASP14P31944 242 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 PBX1P40424 430 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 LIMK2P53671 638 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 PFN3P60673 137 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 RPS18P62269 152 aaKnown RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 ARHGEF7Q14155 803 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 HLTFQ14527 1009 aaKnown RBP eCLIP6.88□□□□□ -1.319e-8■■□□□ 12.4
LDHB-206ENST00000470985 EDRF1Q3B7T1 1238 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 SLC35F1Q5T1Q4 408 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 CRELD2Q6UXH1 353 aaPredicted RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 PAQR9Q6ZVX9 377 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 SLC47A2Q86VL8 602 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 HPS6Q86YV9 775 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 SCUBE1Q8IWY4 988 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 KBTBD2Q8IY47 623 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 CIARTQ8N365 385 aaPredicted RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 LRRC52Q8N7C0 313 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 GRHL3Q8TE85 626 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 RPL10LQ96L21 214 aaKnown RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 NT5C1BQ96P26 610 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 KLF6Q99612 283 aaPredicted RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 TREX2Q9BQ50 279 aaPredicted RBP6.88□□□□□ -1.31
LDHB-206ENST00000470985 C1QTNF3Q9BXJ4 246 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 SH3BGRL2Q9UJC5 107 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 FER1L5A0AVI2 2057 aa6.88□□□□□ -1.31
LDHB-206ENST00000470985 TRGV8A0A0C4DH27 118 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 TLCD2A6NGC4 264 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 FAM171A2A8MVW0 826 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 CCL21O00585 134 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 SLC27A2O14975 620 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 ZNF185O15231 689 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 PROM1O43490 865 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 CLSTN1O94985 981 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 PCDH8O95206 1070 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 ASLP04424 464 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 KRT19P08727 400 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 ZNF20P17024 532 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 CD1CP29017 333 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 ALDH4A1P30038 563 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 VAMP7P51809 220 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 RCAN1P53805 252 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 DNASE1L3Q13609 305 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 LLGL1Q15334 1064 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 KCTD16Q68DU8 428 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 CEACAM20Q6UY09 585 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 FSTL5Q8N475 847 aaPredicted RBP6.87□□□□□ -1.31
LDHB-206ENST00000470985 KDM1BQ8NB78 822 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 TRAPPC9Q96Q05 1148 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 SPAG5Q96R06 1193 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 SMAD5Q99717 465 aaKnown RBP6.87□□□□□ -1.31
LDHB-206ENST00000470985 SMOQ99835 787 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 PLA2G12AQ9BZM1 189 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 ACTL8Q9H568 366 aa6.87□□□□□ -1.31
LDHB-206ENST00000470985 DMAP1Q9NPF5 467 aaPredicted RBP6.87□□□□□ -1.31
LDHB-206ENST00000470985 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.87□□□□□ -1.31
LDHB-206ENST00000470985 CCDC196A0A1B0GTZ2 297 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 B4DGG1 531 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 CRLF1O75462 422 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 CLDN14O95500 239 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 RPA1P27694 616 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 MAZP56270 477 aaKnown RBP6.86□□□□□ -1.31
LDHB-206ENST00000470985 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 MC2RQ01718 297 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 EXOSC10Q01780 885 aaKnown RBP6.86□□□□□ -1.31
LDHB-206ENST00000470985 PPARDQ03181 441 aa6.86□□□□□ -1.31
LDHB-206ENST00000470985 TRA2AQ13595 282 aaKnown RBP eCLIP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms