RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 PTPRRQ15256 657 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 RFLNAQ6ZTI6 216 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 CHST15Q7LFX5 561 aaPredicted RBP13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 ARHGAP22Q7Z5H3 698 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 SLC9B2Q86UD5 537 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 LUZP1Q86V48 1076 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 BMPERQ8N8U9 685 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 AVL9Q8NBF6 648 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 APOBEC4Q8WW27 367 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 IQCDQ96DY2 449 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 HERPUD2Q9BSE4 406 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 ZNF71Q9NQZ8 489 aaPredicted RBP13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 FBXO8Q9NRD0 319 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 VPS18Q9P253 973 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 TTLL3Q9Y4R7 772 aa13.76□□□□□ -0.21
SEMA3F-208ENST00000470737 A0A0U1RQS6 177 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 LOC101059948A0A1B0GTJ6 334 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 GOLGA6L19H0YKK7 550 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 POLR1CO15160 346 aaPredicted RBP13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 SNX2O60749 519 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 STK17BO94768 372 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 NTRK1P04629 796 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 PDHA1P08559 390 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 RARAP10276 462 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 TCN2P20062 427 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 IL1R2P27930 398 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 STC1P52823 247 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 EPHA4P54764 986 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 PTSQ03393 145 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 KLHL30Q0D2K2 578 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 PIGHQ14442 188 aaPredicted RBP13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 DEFB109BQ30KR1 87 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 C16orf46Q6P387 395 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 ZNF571Q7Z3V5 609 aaPredicted RBP13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 ESX1Q8N693 406 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 TEKT4Q8WW24 435 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 STARD8Q92502 1023 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 COX14Q96I36 57 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 PCDH18Q9HCL0 1135 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 NBASA2RRP1 2371 aa13.75□□□□□ -0.21
SEMA3F-208ENST00000470737 COL12A1Q99715 3063 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 KIR2DS5A0A0G2JLQ3 304 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 A0A0G2JNG1 304 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 OR5K4A6NMS3 321 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 KIR2DS3K7RE56 304 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 FZD6O60353 706 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 SERPINC1P01008 464 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 ATP1A1P05023 1023 aaKnown RBP13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 PBX1P40424 430 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 FOXK1P85037 733 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 FANCCQ00597 558 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 KIR2DS5Q14953 304 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 LACTB2Q53H82 288 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 TIGD7Q6NT04 549 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 IYDQ6PHW0 289 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 LYSMD3Q7Z3D4 306 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 PLXDC1Q8IUK5 500 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 PHYKPLQ8IUZ5 450 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 RAVER1Q8IY67 606 aaKnown RBP13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 UNC5BQ8IZJ1 945 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 TEX26Q8N6G2 289 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 CCHCR1Q8TD31 782 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 NAP1L5Q96NT1 182 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 RMI1Q9H9A7 625 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 PKD2L2Q9NZM6 624 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 TBC1D29Q9UFV1 150 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 KCNK6Q9Y257 313 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 PRKAB1Q9Y478 270 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 TMEM184BQ9Y519 407 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 PCDHB3Q9Y5E6 796 aa13.74□□□□□ -0.21
SEMA3F-208ENST00000470737 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 DNAJC6O75061 913 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 CLDN7O95471 211 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 EML2O95834 649 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 ACP5P13686 325 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 F3P13726 295 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 TCF4P15884 667 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 OAS2P29728 719 aaKnown RBP13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 PRKCIP41743 596 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 SSR1P43307 286 aaKnown RBP13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 IGFBP7Q16270 282 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 LPCAT1Q8NF37 534 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 ABHD17AQ96GS6 310 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 SMIM14Q96QK8 99 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 SPRY4Q9C004 299 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 APMAPQ9HDC9 416 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 AIPL1Q9NZN9 384 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 RCOR3Q9P2K3 495 aaPredicted RBP13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 IP6K2Q9UHH9 426 aa13.73□□□□□ -0.21
SEMA3F-208ENST00000470737 AMACRQ9UHK6 382 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 214.4 ms