RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 NUS1Q96E22 293 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 PGAP3Q96FM1 320 aaPredicted RBP8.1□□□□□ -1.11
LSM2-210ENST00000470086 SCARF2Q96GP6 870 aaPredicted RBP8.1□□□□□ -1.11
LSM2-210ENST00000470086 OR2M4Q96R27 311 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 MED15Q96RN5 788 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 SLC38A3Q99624 504 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 TRIM62Q9BVG3 475 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 SUV39H2Q9H5I1 410 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 TMEM248Q9NWD8 314 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 SCHIP1Q9P0W5 487 aaPredicted RBP8.1□□□□□ -1.11
LSM2-210ENST00000470086 COPG2Q9UBF2 871 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 CD84Q9UIB8 345 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.1□□□□□ -1.11
LSM2-210ENST00000470086 J3KR12 359 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 TRAFD1O14545 582 aaPredicted RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 DDX3YO15523 660 aaKnown RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 BUB1O43683 1085 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 KDELR3O43731 214 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 LRCH4O75427 683 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 TMEM63AO94886 807 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 LRIG2O94898 1065 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 F9P00740 461 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 CAPN1P07384 714 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 IVLP07476 585 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 TYRP1P17643 537 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 ITGA3P26006 1051 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 PTPN4P29074 926 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 PTGER4P35408 488 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 SLC6A3Q01959 620 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 GCNT1Q02742 428 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 DHX9Q08211 1270 aaKnown RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 BIRC2Q13490 618 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 ACOX1Q15067 660 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 MEA1Q16626 185 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 C15orf59Q2T9L4 293 aaPredicted RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 PYCR3Q53H96 274 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 AFMIDQ63HM1 303 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 DENND2CQ68D51 928 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 FAM198BQ6UWH4 519 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 LRRC31Q6UY01 552 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 C11orf57Q6ZUT1 292 aaPredicted RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 RHOT1Q8IXI2 618 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 CEP57L1Q8IYX8 460 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 PYROXD2Q8N2H3 581 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 NXPE1Q8N323 547 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 CBARPQ8N350 705 aaPredicted RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 ZBTB2Q8N680 514 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 EMC1Q8N766 993 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 ZNF397Q8NF99 534 aaPredicted RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 NRGNQ92686 78 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 ECHDC3Q96DC8 303 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 C1orf74Q96LT6 269 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 TGM7Q96PF1 710 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 DPYSL5Q9BPU6 564 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 GTPBP4Q9BZE4 634 aaKnown RBP8.09□□□□□ -1.11
LSM2-210ENST00000470086 GOLPH3LQ9H4A5 285 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 GPR83Q9NYM4 423 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 HPSEQ9Y251 543 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 KCNK6Q9Y257 313 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 B3GNT3Q9Y2A9 372 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 ANK2Q01484 3957 aa8.09□□□□□ -1.11
LSM2-210ENST00000470086 HEATR9A2RTY3 570 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 C21orf140B9A014 251 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 INPP4BO15327 924 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 SLC16A3O15427 465 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 RAMP2O60895 175 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 DNAJC6O75061 913 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 RECKO95980 971 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 PLEKP08567 350 aaPredicted RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 EBLN1P0CF75 366 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 FOLR1P15328 257 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 XPAP23025 273 aaPredicted RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 KELP23276 732 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 PRCPP42785 496 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 UBE2IP63279 158 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 PKP1Q13835 747 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 RAPGEF1Q13905 1077 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 RWDD4Q6NW29 188 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 SPOCD1Q6ZMY3 1216 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 ARHGAP36Q6ZRI8 547 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 NCCRP1Q6ZVX7 275 aaPredicted RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 SYVN1Q86TM6 617 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 ENDOVQ8N8Q3 282 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 GLIS1Q8NBF1 620 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 TSEN2Q8NCE0 465 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 THAP4Q8WY91 577 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 SNX21Q969T3 373 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 DTD2Q96FN9 168 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 CCDC120Q96HB5 630 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 NCAPGQ9BPX3 1015 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 CHST8Q9H2A9 424 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 SARS2Q9NP81 518 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
LSM2-210ENST00000470086 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.08□□□□□ -1.12
LSM2-210ENST00000470086 PPARGC1AQ9UBK2 798 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 COPG1Q9Y678 874 aaKnown RBP8.08□□□□□ -1.12
LSM2-210ENST00000470086 IGHV5-51A0A0C4DH38 117 aa8.07□□□□□ -1.12
LSM2-210ENST00000470086 GOLGA6CA6NDK9 693 aa8.07□□□□□ -1.12
LSM2-210ENST00000470086 GOLGA6BA6NDN3 693 aa8.07□□□□□ -1.12
LSM2-210ENST00000470086 NPIPB15A6NHN6 443 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms