RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SLC25A51Q9H1U9 297 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 FAM83DQ9H4H8 585 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 DDX56Q9NY93 547 aaKnown RBP16.18■□□□□ 0.18
COL9A3-208ENST00000469802 PKD2L2Q9NZM6 624 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 PISDQ9UG56 409 aa16.18■□□□□ 0.18
COL9A3-208ENST00000469802 EIF4E1BA6NMX2 242 aaKnown RBP16.17■□□□□ 0.18
COL9A3-208ENST00000469802 ATP1A1P05023 1023 aaKnown RBP16.17■□□□□ 0.18
COL9A3-208ENST00000469802 COMTP21964 271 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 ALDH4A1P30038 563 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 CSF2RBP32927 897 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 CDKN2BP42772 138 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 DCDC1P59894 354 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 PRKD1Q15139 912 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-208ENST00000469802 FAM182AQ5T1J6 154 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 SARM1Q6SZW1 724 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 MFSD7Q6UXD7 560 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 MARK2Q7KZI7 788 aaKnown RBP16.17■□□□□ 0.18
COL9A3-208ENST00000469802 NT5DC3Q86UY8 548 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 PIM3Q86V86 326 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 SFRP1Q8N474 314 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 TTC9Q92623 222 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 RNF25Q96BH1 459 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-208ENST00000469802 WBP1Q96G27 269 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 B3GNT4Q9C0J1 378 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 HYOU1Q9Y4L1 999 aa16.17■□□□□ 0.18
COL9A3-208ENST00000469802 HELZ2Q9BYK8 2649 aaKnown RBP16.17■□□□□ 0.18
COL9A3-208ENST00000469802 IGHV1OR21-1A0A087WYE8 117 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 PRAMEF33A0A0G2JMD5 474 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 IGHV5-10-1A0A0J9YXX1 117 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 A6NCN8 305 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 AKR1B15C9JRZ8 316 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-208ENST00000469802 HGSO14964 777 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-208ENST00000469802 ZW10O43264 779 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 PSTPIP1O43586 416 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 PRAMEF10O60809 474 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 EML2O95834 649 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 NOP2P46087 812 aaKnown RBP16.16■□□□□ 0.18
COL9A3-208ENST00000469802 AMZ1Q400G9 498 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 PHF19Q5T6S3 580 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 JAMLQ86YT9 394 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 RFX6Q8HWS3 928 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 TC2NQ8N9U0 490 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 CCHCR1Q8TD31 782 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 SLC37A2Q8TED4 501 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 AGAP3Q96P47 875 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 MAK16Q9BXY0 300 aaKnown RBP16.16■□□□□ 0.18
COL9A3-208ENST00000469802 RMI1Q9H9A7 625 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 ZFYVE1Q9HBF4 777 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 MAGEE1Q9HCI5 957 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 ADGRG1Q9Y653 693 aa16.16■□□□□ 0.18
COL9A3-208ENST00000469802 C9orf172C9J069 976 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 LCA5LO95447 670 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 ASMTLO95671 621 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 LIPCP11150 499 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 PECAM1P16284 738 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-208ENST00000469802 PTPN3P26045 913 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 NR2C2P49116 596 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 LIMK2P53671 638 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 DYNLT1P63172 113 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 CFHR1Q03591 330 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 CDK18Q07002 472 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 TEX44Q53QW1 395 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-208ENST00000469802 USP53Q70EK8 1073 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 GPR26Q8NDV2 337 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 OR4D9Q8NGE8 314 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 CCDC74BQ96LY2 380 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 CCNL2Q96S94 520 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-208ENST00000469802 GLOD4Q9HC38 313 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.15■□□□□ 0.18
COL9A3-208ENST00000469802 FOXJ2Q9P0K8 574 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 ZNF711Q9Y462 761 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 PRKAB1Q9Y478 270 aa16.15■□□□□ 0.18
COL9A3-208ENST00000469802 A0A0A6YYK5 440 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-208ENST00000469802 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-208ENST00000469802 EFSO43281 561 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 SPOPO43791 374 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 NUAK1O60285 661 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 MT-CYBP00156 380 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-208ENST00000469802 PIRTP0C851 137 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 THRAP10827 490 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 GPLD1P80108 840 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 ADCY2Q08462 1091 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 WASHC5Q12768 1159 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 TRA2AQ13595 282 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL9A3-208ENST00000469802 TGIF1Q15583 401 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 ZNF569Q5MCW4 686 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 NKAIN2Q5VXU1 208 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 PDPK2PQ6A1A2 396 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 CCDC81Q6ZN84 652 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 B4GALNT4Q76KP1 1039 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 TMC3Q7Z5M5 1100 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 DTX1Q86Y01 620 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 RCBTB1Q8NDN9 531 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 SPATA22Q8NHS9 363 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 USP7Q93009 1102 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 TEKT5Q96M29 485 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 DPYSL5Q9BPU6 564 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 ZSCAN5AQ9BUG6 496 aa16.14■□□□□ 0.17
COL9A3-208ENST00000469802 CARD9Q9H257 536 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms