RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ARHGEF18Q6ZSZ5 1173 aa17.61■□□□□ 0.41
MRPL28-208ENST00000469744 YTHDF3Q7Z739 585 aaKnown RBP17.61■□□□□ 0.41
MRPL28-208ENST00000469744 FBXO36Q8NEA4 188 aa17.61■□□□□ 0.41
MRPL28-208ENST00000469744 TFB1MQ8WVM0 346 aaKnown RBP17.61■□□□□ 0.41
MRPL28-208ENST00000469744 SGSM3Q96HU1 749 aa17.61■□□□□ 0.41
MRPL28-208ENST00000469744 NSMCE3Q96MG7 304 aa17.61■□□□□ 0.41
MRPL28-208ENST00000469744 LENG8Q96PV6 779 aaPredicted RBP17.61■□□□□ 0.41
MRPL28-208ENST00000469744 GPR27Q9NS67 375 aa17.61■□□□□ 0.41
MRPL28-208ENST00000469744 TSPAN11A1L157 253 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 SIGLEC6O43699 453 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 PIAS2O75928 621 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 TM7SF2O76062 418 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 ACADVLP49748 655 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 PDK1Q15118 436 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 UGP2Q16851 508 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 TMCO4Q5TGY1 634 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 ADGRD1Q6QNK2 874 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 C3orf62Q6ZUJ4 267 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 TMPRSS7Q7RTY8 843 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 ANKMY2Q8IV38 441 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 LZTR1Q8N653 840 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 KDF1Q8NAX2 398 aaPredicted RBP17.6■□□□□ 0.41
MRPL28-208ENST00000469744 BRD8Q9H0E9 1235 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 NSRP1Q9H0G5 558 aaKnown RBP17.6■□□□□ 0.41
MRPL28-208ENST00000469744 ATP13A3Q9H7F0 1226 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 MBNL1Q9NR56 388 aaKnown RBP17.6■□□□□ 0.41
MRPL28-208ENST00000469744 NKIRAS1Q9NYS0 192 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 KLF15Q9UIH9 416 aa17.6■□□□□ 0.41
MRPL28-208ENST00000469744 RRP15Q9Y3B9 282 aaKnown RBP17.6■□□□□ 0.41
MRPL28-208ENST00000469744 DSPP15924 2871 aaKnown RBP17.6■□□□□ 0.41
MRPL28-208ENST00000469744 PKD1L2Q7Z442 2459 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 CHD6Q8TD26 2715 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 SPTY2D1-AS1A0A0U1RR47 76 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 POC1B-GALNT4F8VUJ3 575 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 NEBLO76041 1014 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 STK10O94804 968 aaKnown RBP17.59■□□□□ 0.41
MRPL28-208ENST00000469744 RABIFP47224 123 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 SCNN1BP51168 640 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 PFN3P60673 137 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 SEMA5AQ13591 1074 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 LBRQ14739 615 aaKnown RBP17.59■□□□□ 0.41
MRPL28-208ENST00000469744 GRM3Q14832 879 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 PRKD1Q15139 912 aaPredicted RBP17.59■□□□□ 0.41
MRPL28-208ENST00000469744 TMED2Q15363 201 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 GKAP1Q5VSY0 366 aaPredicted RBP17.59■□□□□ 0.41
MRPL28-208ENST00000469744 CPLX4Q7Z7G2 160 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 CNPY4Q8N129 248 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 PAF1Q8N7H5 531 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 DENND6BQ8NEG7 585 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 CKAP2Q8WWK9 683 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 HTR3CQ8WXA8 447 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 ASB12Q8WXK4 309 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 ZNF641Q96N77 438 aaPredicted RBP17.59■□□□□ 0.41
MRPL28-208ENST00000469744 TUBGCP5Q96RT8 1024 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 CYTH2Q99418 400 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 WDR83Q9BRX9 315 aaKnown RBP17.59■□□□□ 0.41
MRPL28-208ENST00000469744 RABEP2Q9H5N1 569 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 ETNK1Q9HBU6 452 aa17.59■□□□□ 0.41
MRPL28-208ENST00000469744 XAB2Q9HCS7 855 aaKnown RBP17.59■□□□□ 0.41
MRPL28-208ENST00000469744 KNTC1P50748 2209 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 PPP1R12AO14974 1030 aaPredicted RBP17.58■□□□□ 0.41
MRPL28-208ENST00000469744 RFPL3O75679 317 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 PEX11BO96011 259 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 MLNP12872 115 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 MYF5P13349 255 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 C6P13671 934 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 SERPINA4P29622 427 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 SSTR1P30872 391 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 ELK3P41970 407 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 MAGEA3P43357 314 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 CSNK1DP48730 415 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 SARNPP82979 210 aaKnown RBP17.58■□□□□ 0.41
MRPL28-208ENST00000469744 ELP6Q0PNE2 266 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 ZNF235Q14590 738 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 RFTN1Q14699 578 aaPredicted RBP17.58■□□□□ 0.41
MRPL28-208ENST00000469744 IRF4Q15306 451 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 PROX2Q3B8N5 592 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 TMEM52BQ4KMG9 183 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 BRAT1Q6PJG6 821 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 C6orf89Q6UWU4 347 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 PARGQ86W56 976 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 DCP2Q8IU60 420 aaKnown RBP17.58■□□□□ 0.41
MRPL28-208ENST00000469744 SRRM1Q8IYB3 904 aaKnown RBP17.58■□□□□ 0.41
MRPL28-208ENST00000469744 PGBD5Q8N414 524 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 ATPAF2Q8N5M1 289 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 TP53I13Q8NBR0 393 aaPredicted RBP17.58■□□□□ 0.41
MRPL28-208ENST00000469744 FAM174AQ8TBP5 190 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 FBF1Q8TES7 1133 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 SPATA13Q96N96 652 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 PSKH2Q96QS6 385 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 KCNK9Q9NPC2 374 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 EIF2B3Q9NR50 452 aaKnown RBP17.58■□□□□ 0.41
MRPL28-208ENST00000469744 SEPT3Q9UH03 358 aa17.58■□□□□ 0.41
MRPL28-208ENST00000469744 APC2O95996 2303 aa17.58■□□□□ 0.4
MRPL28-208ENST00000469744 TMEM8BA6NDV4 472 aa17.57■□□□□ 0.4
MRPL28-208ENST00000469744 MFSD11O43934 449 aa17.57■□□□□ 0.4
MRPL28-208ENST00000469744 MAFKO60675 156 aa17.57■□□□□ 0.4
MRPL28-208ENST00000469744 MAP3K6O95382 1288 aa17.57■□□□□ 0.4
MRPL28-208ENST00000469744 GIMD1P0DJR0 217 aa17.57■□□□□ 0.4
MRPL28-208ENST00000469744 CREB1P16220 341 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms