RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	STPG1	Q5TH74	334 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	KYAT3	Q6YP21	454 aa	Known RBP	13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	MICALCL	Q6ZW33	695 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	NLRP9	Q7RTR0	991 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	RABEPK	Q7Z6M1	372 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	HEATR4	Q86WZ0	1026 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	RAVER1	Q8IY67	606 aa	Known RBP	13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	MFSD2A	Q8NA29	543 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	OR13H1	Q8NG92	308 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	OR6P1	Q8NGX9	317 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	CEP76	Q8TAP6	659 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	GDAP1	Q8TB36	358 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	FBXO25	Q8TCJ0	367 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	ART4	Q93070	314 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	HDAC10	Q969S8	669 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	CDKN2AIPNL	Q96HQ2	116 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	SIGLEC10	Q96LC7	697 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	PLEKHG4B	Q96PX9	1271 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	ZSCAN5A	Q9BUG6	496 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	NUSAP1	Q9BXS6	441 aa	Known RBP	13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	CDH19	Q9H159	772 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	WDR26	Q9H7D7	661 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	UGT1A7	Q9HAW7	530 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	UGT1A10	Q9HAW8	530 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	UGT1A8	Q9HAW9	530 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	IL26	Q9NPH9	171 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	FSCN3	Q9NQT6	498 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	MOSPD1	Q9UJG1	213 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	APPL1	Q9UKG1	709 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	ZMIZ1	Q9ULJ6	1067 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	SOX13	Q9UN79	622 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	SLC30A1	Q9Y6M5	507 aa		13.56	□□□□□ -0.24
LMNA-210	ENST00000469565	PIKFYVE	Q9Y2I7	2098 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	CABIN1	Q9Y6J0	2220 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565		A0A1W2PR77	199 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	MAGEB16	A2A368	324 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	FADS2P1	A8MWK0	482 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	CACNB4	O00305	520 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	KHNYN	O15037	678 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	TP73	O15350	636 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	SRP72	O76094	671 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	SLC25A14	O95258	325 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	PRAMEF1	O95521	474 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ASMTL	O95671	621 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	PYGL	P06737	847 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	HOXB3	P14651	431 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	MAGEA3	P43357	314 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ARSD	P51689	593 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	CDK3	Q00526	305 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	PDE1C	Q14123	709 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	SMAD1	Q15797	465 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ATP13A5	Q4VNC0	1218 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	DOK6	Q6PKX4	331 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	UNQ6494/PRO21346	Q6UXR6	183 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	CENPU	Q71F23	418 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	TAS2R42	Q7RTR8	314 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ABI3BP	Q7Z7G0	1075 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	TRIM74	Q86UV6	250 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	NLRP8	Q86W28	1048 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ANKMY2	Q8IV38	441 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	IFT20	Q8IY31	132 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	TRAM1L1	Q8N609	369 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	OTUD6B	Q8N6M0	293 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	FAM174A	Q8TBP5	190 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ZNF398	Q8TD17	642 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	PTCD2	Q8WV60	388 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ZNF669	Q96BR6	464 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	MFSD3	Q96ES6	412 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	STAMBPL1	Q96FJ0	436 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	CFAP36	Q96G28	342 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	HIC2	Q96JB3	615 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	TRIM56	Q9BRZ2	755 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	KIFC1	Q9BW19	673 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	FAM96A	Q9H5X1	160 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ASB8	Q9H765	288 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	MRM3	Q9HC36	420 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ARFGAP3	Q9NP61	516 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	SAYSD1	Q9NPB0	183 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	MTRF1L	Q9UGC7	380 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	SLC6A14	Q9UN76	642 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	CHMP2B	Q9UQN3	213 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	ANKRD6	Q9Y2G4	727 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	RPS6KL1	Q9Y6S9	549 aa		13.55	□□□□□ -0.24
LMNA-210	ENST00000469565	CCDC162P	A2VCL2	907 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	OR51F1	A6NGY5	319 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	C1QTNF9B	B2RNN3	333 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	VILL	O15195	856 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	GPR39	O43194	453 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	GOT2	P00505	430 aa	Known RBP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	C1QTNF9	P0C862	333 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	PAM	P19021	973 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	ITGAL	P20701	1170 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	HTR1B	P28222	390 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	HOXD12	P35452	270 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	ELK3	P41970	407 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	CARS	P49589	748 aa	Known RBP	13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	PFN3	P60673	137 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	YPEL5	P62699	121 aa		13.54	□□□□□ -0.24
LMNA-210	ENST00000469565	IRX4	P78413	519 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms