RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 SPATS2LQ9NUQ6 558 aaKnown RBP17.74■□□□□ 0.43
MCF2L-221ENST00000469415 C6orf203Q9P0P8 240 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-221ENST00000469415 ZMYM5Q9UJ78 669 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 VPS28Q9UK41 221 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 LZTS1Q9Y250 596 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 SH3BP1Q9Y3L3 701 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 KIF3CO14782 793 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 CAPN15O75808 1086 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
MCF2L-221ENST00000469415 CNPY1Q3B7I2 92 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 LCA5Q86VQ0 697 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 APOL5Q9BWW9 433 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 FAM8A1Q9UBU6 413 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 MED16Q9Y2X0 877 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 OR6C75A6NL08 312 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 C2orf81A6NN90 581 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 PAPSS2O95340 614 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-221ENST00000469415 PRLP01236 227 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 INHAP05111 366 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 POLD2P49005 469 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 YBEYP58557 167 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-221ENST00000469415 GPNMBQ14956 572 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 FAM151BQ6UXP7 276 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 CAMK1DQ8IU85 385 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 OR52B6Q8NGF0 335 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 HGH1Q9BTY7 390 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 SLC25A23Q9BV35 468 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 PRM3Q9NNZ6 103 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 POLG2Q9UHN1 485 aa17.74■□□□□ 0.43
MCF2L-221ENST00000469415 OR4F21O95013 312 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 ATP6V1B2P21281 511 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 RAD51Q06609 339 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 UGT3A2Q3SY77 523 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 LRRC73Q5JTD7 316 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 HECTD3Q5T447 861 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 RANBP9Q96S59 729 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 ATOH8Q96SQ7 321 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 SQORQ9Y6N5 450 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 C7orf72A4D263 438 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 SNX2O60749 519 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 CLIC3O95833 236 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 SELPP16109 830 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 NRG1Q02297 640 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-221ENST00000469415 TRAF2Q12933 501 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.73■□□□□ 0.43
MCF2L-221ENST00000469415 TIGD2Q4W5G0 525 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 SETMARQ53H47 684 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-221ENST00000469415 UGT2A3Q6UWM9 527 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.73■□□□□ 0.43
MCF2L-221ENST00000469415 CCDC117Q8IWD4 279 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-221ENST00000469415 GPR63Q9BZJ6 419 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 CAAP1Q9H8G2 361 aa17.73■□□□□ 0.43
MCF2L-221ENST00000469415 EVLQ9UI08 416 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-221ENST00000469415 GIPC1O14908 333 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 TBL1XO60907 577 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 GJA1P17302 382 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 UGT1A1P22309 533 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 UGT1A4P22310 534 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 UGT1A3P35503 534 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 UGT1A5P35504 534 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 GDF5P43026 501 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 MAGEA11P43364 429 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 FAM26DQ5JW98 314 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 ANKS6Q68DC2 871 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 TPGS1Q6ZTW0 290 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 DHFR2Q86XF0 187 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 STAG3L4Q8TBR4 150 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 FAR2Q96K12 515 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 PDFQ9HBH1 243 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 MAP10Q9P2G4 905 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 TRMT6Q9UJA5 497 aaKnown RBP17.72■□□□□ 0.43
MCF2L-221ENST00000469415 ZNF840PA6NDX5 716 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 NME4O00746 187 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 STC2O76061 302 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 TRIM16O95361 564 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 MBL2P11226 248 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-221ENST00000469415 UFM1P61960 85 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 FAM189BP81408 668 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 PLOD1Q02809 727 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-221ENST00000469415 CHSY3Q70JA7 882 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 ASB9Q96DX5 294 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 SEPHS2Q99611 448 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 CENPKQ9BS16 269 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 NLRC5Q86WI3 1866 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 FFAR3O14843 346 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 GPR42O15529 346 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 TMCC1O94876 653 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 STAMBPO95630 424 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 CNPP09543 421 aaKnown RBP17.72■□□□□ 0.43
MCF2L-221ENST00000469415 GPX3P22352 226 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 MRPL58Q14197 206 aaKnown RBP17.72■□□□□ 0.43
MCF2L-221ENST00000469415 MAPRE2Q15555 327 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 TXNDC8Q6A555 127 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 SYVN1Q86TM6 617 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 RALGPS2Q86X27 583 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-221ENST00000469415 MIER2Q8N344 545 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 WFDC5Q8TCV5 224 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 PSKH2Q96QS6 385 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 BOCQ9BWV1 1114 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 SRRDQ9UH36 339 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms