RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ZYG11AQ6WRX3 759 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 PARS2Q7L3T8 475 aaKnown RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 SPATS2Q86XZ4 545 aaKnown RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 PIP4K2CQ8TBX8 421 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 ANKRD49Q8WVL7 239 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 THOC1Q96FV9 657 aaKnown RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 MRPL46Q9H2W6 279 aaKnown RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 XPR1Q9UBH6 696 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 SARDHQ9UL12 918 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 PPM1HQ9ULR3 514 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 COMMD10Q9Y6G5 202 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 PRMT5O14744 637 aaPredicted RBP18.85■□□□□ 0.61
SMC4-209ENST00000468653 VPS26AO75436 327 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 WISP3O95389 354 aaPredicted RBP18.85■□□□□ 0.61
SMC4-209ENST00000468653 ESR1P03372 595 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 EPHX1P07099 455 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 ADARP55265 1226 aaKnown RBP18.85■□□□□ 0.61
SMC4-209ENST00000468653 OVGP1Q12889 678 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 ITIH4Q14624 930 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 DPPA4Q7L190 304 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 DSG4Q86SJ6 1040 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 SPNS2Q8IVW8 549 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 RBFAQ8N0V3 343 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 TMEM151AQ8N4L1 468 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 PLEKHG4BQ96PX9 1271 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 SYTL2Q9HCH5 934 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 ZDHHC4Q9NPG8 344 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 CACNA2D2Q9NY47 1150 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 PCDHB1Q9Y5F3 818 aa18.85■□□□□ 0.61
SMC4-209ENST00000468653 C5orf42Q9H799 3197 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 TRBV5-4A0A0C4DH59 114 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 IL1BP01584 269 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 RBP1P09455 135 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 GRK2P25098 689 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 ITGB7P26010 798 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 ACRV1P26436 265 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 GALK1P51570 392 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 ITGA9Q13797 1035 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 ACAP2Q15057 778 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 AAK1Q2M2I8 961 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 CTSL3PQ5NE16 218 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 CES4AQ5XG92 561 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 RFLNAQ6ZTI6 216 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 PPP1R16AQ96I34 528 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 C7orf26Q96N11 449 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 FAM129BQ96TA1 746 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 ACOX2Q99424 681 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 P2RY13Q9BPV8 354 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 CLPBQ9H078 707 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 P2RY12Q9H244 342 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 FBRSL1Q9HCM7 1045 aaKnown RBP18.84■□□□□ 0.61
SMC4-209ENST00000468653 NPHS2Q9NP85 383 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 THAP1Q9NVV9 213 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
SMC4-209ENST00000468653 ARL2BPQ9Y2Y0 163 aa18.84■□□□□ 0.61
SMC4-209ENST00000468653 E5RI56 91 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 TRIM13O60858 407 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 NIPSNAP2O75323 286 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 SBK3P0C264 359 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 ZNF37AP17032 561 aaPredicted RBP18.83■□□□□ 0.61
SMC4-209ENST00000468653 CHRM3P20309 590 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 RGS19P49795 217 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 E2F5Q15329 346 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 PTRHD1Q6GMV3 140 aaKnown RBP18.83■□□□□ 0.61
SMC4-209ENST00000468653 FBXL19Q6PCT2 694 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 HSD11B1LQ7Z5J1 315 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 NXPE1Q8N323 547 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 GPR21Q99679 349 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 TRIM55Q9BYV6 548 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 PRSS16Q9NQE7 514 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 DYRK4Q9NR20 520 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 OXSMQ9NWU1 459 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 KLHL14Q9P2G3 628 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 HCN2Q9UL51 889 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 MTF2Q9Y483 593 aaPredicted RBP18.83■□□□□ 0.61
SMC4-209ENST00000468653 MUC22E2RYF6 1773 aaPredicted RBP18.83■□□□□ 0.61
SMC4-209ENST00000468653 SCN8AQ9UQD0 1980 aa18.83■□□□□ 0.61
SMC4-209ENST00000468653 ANTXRLA6NF34 631 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 GRXCR2A6NFK2 248 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 TARM1B6A8C7 271 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 SNNO75324 88 aaPredicted RBP18.83■□□□□ 0.6
SMC4-209ENST00000468653 H2AFYO75367 372 aaKnown RBP18.83■□□□□ 0.6
SMC4-209ENST00000468653 TFEBP19484 476 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 CA5AP35218 305 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 SLC1A6P48664 564 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 OCRLQ01968 901 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 IFT88Q13099 833 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 TECRLQ5HYJ1 363 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 UGT3A1Q6NUS8 523 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 PAQR3Q6TCH7 311 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 CRLF3Q8IUI8 442 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 SUGP1Q8IWZ8 645 aaKnown RBP18.83■□□□□ 0.6
SMC4-209ENST00000468653 CHPFQ8IZ52 775 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 KCNJ9Q92806 393 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 ARRDC3Q96B67 414 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 ERLEC1Q96DZ1 483 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 SGF29Q96ES7 293 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 PLCD4Q9BRC7 762 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 FAM83DQ9H4H8 585 aa18.83■□□□□ 0.6
SMC4-209ENST00000468653 ZNF395Q9H8N7 513 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms