RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 DCAF12Q5T6F0 453 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 NCBP2-AS2Q69YL0 99 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 CACNA2D3Q8IZS8 1091 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 LPCAT1Q8NF37 534 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 FAM71BQ8TC56 605 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 SYN2Q92777 582 aaPredicted RBP17.13■□□□□ 0.33
TRIM56-203ENST00000467847 GEMIN8Q9NWZ8 242 aaKnown RBP17.13■□□□□ 0.33
TRIM56-203ENST00000467847 VPS18Q9P253 973 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 PRKAB1Q9Y478 270 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 A0A1W2PQJ5 194 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 TERTO14746 1132 aaKnown RBP17.12■□□□□ 0.33
TRIM56-203ENST00000467847 SUV39H1O43463 412 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 DNAJC6O75061 913 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 CLDN7O95471 211 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 SERPING1P05155 500 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 CCNCP24863 283 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 ARSEP51690 589 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 RPL26P61254 145 aaKnown RBP17.12■□□□□ 0.33
TRIM56-203ENST00000467847 HHEXQ03014 270 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 NFATC2Q13469 925 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 SNAP47Q5SQN1 464 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.12■□□□□ 0.33
TRIM56-203ENST00000467847 ANKS6Q68DC2 871 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 BORAQ6PGQ7 559 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 CHST15Q7LFX5 561 aaPredicted RBP17.12■□□□□ 0.33
TRIM56-203ENST00000467847 KCTD6Q8NC69 237 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 FATE1Q969F0 183 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 SLC25A18Q9H1K4 315 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 STN1Q9H668 368 aaKnown RBP17.12■□□□□ 0.33
TRIM56-203ENST00000467847 PCDH9Q9HC56 1237 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 AMACRQ9UHK6 382 aa17.12■□□□□ 0.33
TRIM56-203ENST00000467847 RPL26L1Q9UNX3 145 aaKnown RBP17.12■□□□□ 0.33
TRIM56-203ENST00000467847 PCYT1BQ9Y5K3 369 aaPredicted RBP17.12■□□□□ 0.33
TRIM56-203ENST00000467847 A0A087X0T9 212 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 C1orf232A0A0U1RR37 186 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 A8MU76 341 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 RAD1O60671 282 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 PRLP01236 227 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 FAM228BP0C875 321 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 NIPAL4Q0D2K0 466 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 ATP13A4Q4VNC1 1196 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 ANKRD20A8PQ5CZ79 823 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 WDR74Q6RFH5 385 aaPredicted RBP17.11■□□□□ 0.33
TRIM56-203ENST00000467847 RAVER1Q8IY67 606 aaKnown RBP17.11■□□□□ 0.33
TRIM56-203ENST00000467847 ARRDC2Q8TBH0 407 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 TSGA13Q96PP4 275 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 TEFMQ96QE5 360 aaKnown RBP17.11■□□□□ 0.33
TRIM56-203ENST00000467847 ZNF670Q9BS34 389 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 SARS2Q9NP81 518 aaKnown RBP17.11■□□□□ 0.33
TRIM56-203ENST00000467847 PDP2Q9P2J9 529 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 TBC1D29Q9UFV1 150 aa17.11■□□□□ 0.33
TRIM56-203ENST00000467847 CNOT6Q9ULM6 557 aaKnown RBP17.11■□□□□ 0.33
TRIM56-203ENST00000467847 OAS3Q9Y6K5 1087 aaKnown RBP17.11■□□□□ 0.33
TRIM56-203ENST00000467847 HLA-DQB2P05538 268 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 ACP5P13686 325 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 IQCB1Q15051 598 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 PDK2Q15119 407 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 ALKBH5Q6P6C2 394 aaKnown RBP17.1■□□□□ 0.33
TRIM56-203ENST00000467847 IYDQ6PHW0 289 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 BMPERQ8N8U9 685 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 ZNF564Q8TBZ8 553 aaPredicted RBP17.1■□□□□ 0.33
TRIM56-203ENST00000467847 CCHCR1Q8TD31 782 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 LRRN4Q8WUT4 740 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 CPLX3Q8WVH0 158 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 NCSTNQ92542 709 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 SH3KBP1Q96B97 665 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 WDR24Q96S15 920 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 LYSMD1Q96S90 227 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 CTRCQ99895 268 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 HERPUD2Q9BSE4 406 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 ADNPQ9H2P0 1102 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 FAM83DQ9H4H8 585 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 RMI1Q9H9A7 625 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 PILRAQ9UKJ1 303 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 KCNK6Q9Y257 313 aa17.1■□□□□ 0.33
TRIM56-203ENST00000467847 FADS2P1A8MWK0 482 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 SNX2O60749 519 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 SLC2A4P14672 509 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 MX2P20592 715 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 MAN1A1P33908 653 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 MAPK9P45984 424 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 SPINT3P49223 89 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 POLE2P56282 527 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 ZBED6P86452 979 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 MC2RQ01718 297 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 GBE1Q04446 702 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 HENMT1Q5T8I9 393 aaKnown RBP17.09■□□□□ 0.33
TRIM56-203ENST00000467847 CAVIN1Q6NZI2 390 aaKnown RBP17.09■□□□□ 0.33
TRIM56-203ENST00000467847 LYSMD3Q7Z3D4 306 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 ARHGAP22Q7Z5H3 698 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 SLC9B2Q86UD5 537 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 MAP7D3Q8IWC1 876 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 CCNYQ8ND76 341 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 RTP4Q96DX8 246 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 PKD2L2Q9NZM6 624 aa17.09■□□□□ 0.33
TRIM56-203ENST00000467847 ZNF891A8MT65 544 aaPredicted RBP17.08■□□□□ 0.32
TRIM56-203ENST00000467847 CAPN5O15484 640 aaPredicted RBP17.08■□□□□ 0.32
TRIM56-203ENST00000467847 PBX1P40424 430 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms