RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SHBQ15464 509 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 MAPRE1Q15691 268 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 BMP2KLQ5H9B9 411 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 SFMBT2Q5VUG0 894 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 METRNLQ641Q3 311 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 SLC39A4Q6P5W5 647 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 FAM171BQ6P995 826 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 MED25Q71SY5 747 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 TTC7BQ86TV6 843 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 ADGRF2Q8IZF7 708 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 EID2Q8N6I1 236 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 LRRC52Q8N7C0 313 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 OVCA2Q8WZ82 227 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 WASF1Q92558 559 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 FUBP1Q96AE4 644 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 SKA1Q96BD8 255 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 BIRC7Q96CA5 298 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 C8orf48Q96LL4 319 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 Q96MF0 132 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 SYT15Q9BQS2 421 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 BBS2Q9BXC9 721 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 TRIM9Q9C026 710 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 C11orf54Q9H0W9 315 aaPredicted RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 LHX5Q9H2C1 402 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 POLR1BQ9H9Y6 1135 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 TBCCD1Q9NVR7 557 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 GDAP2Q9NXN4 497 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 DDX56Q9NY93 547 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 FAM30AQ9NZY2 134 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 WDR35Q9P2L0 1181 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 SLC17A6Q9P2U8 582 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 THAP10Q9P2Z0 257 aaPredicted RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 ORC3Q9UBD5 711 aaPredicted RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 MAN2B2Q9Y2E5 1009 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 SLC27A6Q9Y2P4 619 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 LUC7L2Q9Y383 392 aaKnown RBP4.3□□□□□ -1.72
SSR3-204ENST00000467733 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 APCP25054 2843 aa4.3□□□□□ -1.72
SSR3-204ENST00000467733 NAV3Q8IVL0 2385 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 CSMD1Q96PZ7 3565 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 PCNX1Q96RV3 2341 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 ZFC3H1O60293 1989 aaKnown RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 E9PMD0 336 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 F8VP50 259 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 K7ENM7 598 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 KIAA0391O15091 583 aaKnown RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 HCRTO43612 131 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 ATP2C2O75185 946 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 USP12O75317 370 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 RTN3O95197 1032 aaPredicted RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 IL18RAPO95256 599 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 AMY1AP04745 511 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 IGHV4-34P06331 123 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 PDGFRBP09619 1106 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 CISD3P0C7P0 127 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 SFTPCP11686 197 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 PRKCHP24723 683 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 ARRB1P49407 418 aaPredicted RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 ACOT2P49753 483 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 ZNF81P51508 661 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 CDH8P55286 799 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 MRPS35P82673 323 aaKnown RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 ST3GAL1Q11201 340 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 ZNF234Q14588 700 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 LINC00303Q3SY05 128 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 HECTD3Q5T447 861 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 THEMIS2Q5TEJ8 643 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 SNX30Q5VWJ9 437 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 FOXR2Q6PJQ5 311 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 RUFY3Q7L099 469 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 ANKS1BQ7Z6G8 1248 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 DIS3L2Q8IYB7 885 aaKnown RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 FITM2Q8N6M3 262 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 AOPEPQ8N6M6 819 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 OR56A1Q8NGH5 318 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 OR2T3Q8NH03 318 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 UCMAQ8WVF2 138 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 FBXO32Q969P5 355 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 WBP2Q969T9 261 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 HSPBAP1Q96EW2 488 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 PCED1BQ96HM7 432 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 CLPTM1LQ96KA5 538 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 SEMA3CQ99985 751 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 HEPHQ9BQS7 1158 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 BTBD1Q9H0C5 482 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 GDF3Q9NR23 364 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 TMEM30AQ9NV96 361 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 KCND2Q9NZV8 630 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 LARSQ9P2J5 1176 aaKnown RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 LSM7Q9UK45 103 aaKnown RBP4.29□□□□□ -1.72
SSR3-204ENST00000467733 ITGA11Q9UKX5 1188 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 CDH9Q9ULB4 789 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 LIMCH1Q9UPQ0 1083 aa4.29□□□□□ -1.72
SSR3-204ENST00000467733 AKAP9Q99996 3911 aa4.28□□□□□ -1.72
SSR3-204ENST00000467733 FBN3Q75N90 2809 aa4.28□□□□□ -1.72
SSR3-204ENST00000467733 HIVEP1P15822 2718 aa4.28□□□□□ -1.72
SSR3-204ENST00000467733 A0A1W2PPC4 97 aa4.28□□□□□ -1.72
SSR3-204ENST00000467733 TCRBV7S2A1N4TA0A589 114 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms