RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 IGLV3-19P01714 112 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 ERVK-10P10266 1014 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PHBP35232 272 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 XIAPP98170 497 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PEX6Q13608 980 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 LONRF1Q17RB8 773 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 HSP90AA5PQ58FG0 334 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SEL1L3Q68CR1 1132 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 FAM151BQ6UXP7 276 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PTAR1Q7Z6K3 402 aaPredicted RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 TECPR1Q7Z6L1 1165 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 KCNMB4Q86W47 210 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SCAMP4Q969E2 229 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 TOE1Q96GM8 510 aaKnown RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 IL26Q9NPH9 171 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 MOCS1Q9NZB8 636 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SLC17A6Q9P2U8 582 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 WDR37Q9Y2I8 494 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 THADAQ6YHU6 1953 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF318Q5VUA4 2279 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 CCDC162PA2VCL2 907 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 HMGB1P1B2RPK0 211 aaPredicted RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 GAPDHSO14556 408 aaPredicted RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 WNT9AO14904 365 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 LZTS3O60299 673 aaPredicted RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SASH3O75995 380 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 TM7SF2O76062 418 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PRAMEF1O95521 474 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 GOT2P00505 430 aaKnown RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 C1QAP02745 245 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 GSTA2P09210 222 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PRSS56P0CW18 603 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 EZRP15311 586 aaKnown RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PSMA3P25788 255 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 MAT2AP31153 395 aaKnown RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 MC4RP32245 332 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 STX2P32856 288 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SPAM1P38567 509 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PPP2CBP62714 309 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PPP2CAP67775 309 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 DMWDQ09019 674 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 EFTUD2Q15029 972 aaKnown RBP eCLIP6.83□□□□□ -1.322e-10■■■■■ 44.3
SCAF4-204ENST00000467731 SPDYCQ5MJ68 293 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 ALS2CLQ60I27 953 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 C1orf210Q8IVY1 113 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PNPLA1Q8N8W4 532 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 KLK6Q92876 244 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 DTD2Q96FN9 168 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 COQ10AQ96MF6 247 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 AGAP2Q99490 1192 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 C19orf43Q9BQ61 176 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SGK2Q9HBY8 427 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 PREBQ9HCU5 417 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SMYD2Q9NRG4 433 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 WSB2Q9NYS7 404 aaPredicted RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 ZFATQ9P243 1243 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 RABGEF1Q9UJ41 708 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 IGHV1OR15-9A0A0B4J2B8 117 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 GLYATL1P3A0A0U1RQE8 302 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 A0A1W2PQU0 124 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 LAMTOR5O43504 91 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 RNGTTO60942 597 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 SEMA4FO95754 770 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 SHBGP04278 402 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 F7P08709 466 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 ABHD2P08910 425 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 TSHRP16473 764 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CD6P30203 668 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CDKN1CP49918 316 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 RPS21P63220 83 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CASP8Q14790 479 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 TMEM259Q4ZIN3 620 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 HENMT1Q5T8I9 393 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PDPK2PQ6A1A2 396 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 KIAA1161Q6NSJ0 714 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 AFTPHQ6ULP2 937 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 HORMAD1Q86X24 394 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FBXL6Q8N531 539 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 OR2T34Q8NGX1 318 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 OR4L1Q8NH43 312 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 OR2W6PQ8NHA6 318 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 NUS1Q96E22 293 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FUT8Q9BYC5 575 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 ACSS3Q9H6R3 686 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PRMT8Q9NR22 394 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 APPL1Q9UKG1 709 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 INVSQ9Y283 1065 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 N6AMT1Q9Y5N5 214 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 KMT2EQ8IZD2 1858 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FAM86C2PA6NEL3 165 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 LRRC72A6NJI9 287 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FAM159BA6NKW6 160 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CXorf49A8MYA2 514 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 TNFRSF10AO00220 468 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 AXIN1O15169 862 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PEX14O75381 377 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 SRP72O76094 671 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PAK4O96013 591 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 OXTRP30559 389 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 DCDC1P59894 354 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms