RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TCRBV7S3A2A0A539 114 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 AGAP14A8MT82 685 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 LMO7DNF2Z398 122 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 H7C0S8 307 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 CCDC188H7C350 402 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 TRIM38O00635 465 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 SCAMP1O15126 338 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 INPP4BO15327 924 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 STX7O15400 261 aaKnown RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 AQP9O43315 295 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 DKK1O94907 266 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 PRAMEF1O95521 474 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 CELA2BP08218 269 aaPredicted RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 CEACAM1P13688 526 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 TPH1P17752 444 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 MAGEA3P43357 314 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 VPS41P49754 854 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 ACVR1Q04771 509 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 SUZ12Q15022 739 aaKnown RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 CHRNA6Q15825 494 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 PROX2Q3B8N5 592 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 ATP13A5Q4VNC0 1218 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 KHDC1Q4VXA5 237 aaKnown RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 CERCAMQ5T4B2 595 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 ANKRD22Q5VYY1 191 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 ENPP7Q6UWV6 458 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 FAM151BQ6UXP7 276 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 PPP1R21Q6ZMI0 780 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 HID1Q8IV36 788 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 FSTL5Q8N475 847 aaPredicted RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 DDHD1Q8NEL9 900 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 OR4K2Q8NGD2 314 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 OR13C4Q8NGS5 318 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 OR4C6Q8NH72 309 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 DNAJC1Q96KC8 554 aaKnown RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 RUNDC3BQ96NL0 473 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 SPATA16Q9BXB7 569 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 SLC13A1Q9BZW2 595 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 MRPL40Q9NQ50 206 aaKnown RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 NLGN3Q9NZ94 848 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 SPASTQ9UBP0 616 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 FKBPLQ9UIM3 349 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 RIMKLBQ9ULI2 386 aa10.96□□□□□ -0.65
MSH5-212ENST00000467319 PCYT1BQ9Y5K3 369 aaPredicted RBP10.96□□□□□ -0.65
MSH5-212ENST00000467319 LY6G6EA0A0G2JKS1 128 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 DCDC2BA2VCK2 349 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 GPR89AB7ZAQ6 455 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 TPP1O14773 563 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 GIPC1O14908 333 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 DNAJC6O75061 913 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 KCNK5O95279 499 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 GPR89BP0CG08 455 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 IVDP26440 423 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 CA5AP35218 305 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 POLD2P49005 469 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 LMAN1P49257 510 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 NOVA1P51513 510 aaKnown RBP10.95□□□□□ -0.66
MSH5-212ENST00000467319 PEX6Q13608 980 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 PRRT3Q5FWE3 981 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 ARMC3Q5W041 872 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 PSAPL1Q6NUJ1 521 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 SYDE1Q6ZW31 735 aaPredicted RBP10.95□□□□□ -0.66
MSH5-212ENST00000467319 JAMLQ86YT9 394 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 SDR16C5Q8N3Y7 309 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 NAT8LQ8N9F0 302 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 DNAAF3Q8N9W5 541 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 OR13J1Q8NGT2 312 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 LMX1AQ8TE12 382 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 PEX13Q92968 403 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 TRIM44Q96DX7 344 aaPredicted RBP10.95□□□□□ -0.66
MSH5-212ENST00000467319 OR2M4Q96R27 311 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 CDC6Q99741 560 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 CYP4F12Q9HCS2 524 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 NLE1Q9NVX2 485 aaPredicted RBP10.95□□□□□ -0.66
MSH5-212ENST00000467319 TRNAU1APQ9NX07 287 aaKnown RBP10.95□□□□□ -0.66
MSH5-212ENST00000467319 TOR4AQ9NXH8 423 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 SUFUQ9UMX1 484 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 TCAF1Q9Y4C2 921 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 ST14Q9Y5Y6 855 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 U3KQA8 63 aa10.95□□□□□ -0.66
MSH5-212ENST00000467319 PCNX2A6NKB5 2137 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 TRBV5-4A0A0C4DH59 114 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 HEATR9A2RTY3 570 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 NEMP2A6NFY4 417 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 PRR19A6NJB7 356 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 CCL22O00626 93 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 CHUKO15111 745 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 FFAR2O15552 330 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 SIGLEC6O43699 453 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 SRP72O76094 671 aaKnown RBP10.94□□□□□ -0.66
MSH5-212ENST00000467319 MLNP12872 115 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 HADHAP40939 763 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 PAFAH1B1P43034 410 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 ARSDP51689 593 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 DR1Q01658 176 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 NFATC2Q13469 925 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 ITGA9Q13797 1035 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 SEPT6Q14141 434 aa10.94□□□□□ -0.66
MSH5-212ENST00000467319 DHX34Q14147 1143 aaKnown RBP10.94□□□□□ -0.66
MSH5-212ENST00000467319 ELOCQ15369 112 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms