RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 IRF4Q15306 451 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 GPR33Q49SQ1 333 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 UBAP2Q5T6F2 1119 aaKnown RBP13.18□□□□□ -0.3
PDCD11-202ENST00000466959 ZNF449Q6P9G9 518 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 TRMT10BQ6PF06 316 aaKnown RBP13.18□□□□□ -0.3
PDCD11-202ENST00000466959 CYS1Q717R9 158 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 LPCAT2Q7L5N7 544 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 KCNMB4Q86W47 210 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 MREGQ8N565 214 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 ZBTB44Q8NCP5 570 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 OR4L1Q8NH43 312 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 DUSP15Q9H1R2 295 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-202ENST00000466959 CATSPERZQ9NTU4 200 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 MOCS1Q9NZB8 636 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 PCDHGA2Q9Y5H1 932 aa13.18□□□□□ -0.3
PDCD11-202ENST00000466959 SPAG17Q6Q759 2223 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 BPTFQ12830 3046 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 TRBV5-4A0A0C4DH59 114 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 A0A1W2PPC4 97 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 TCRBV9S1A1TA0A576 114 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 MEI4A8MW99 385 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 FADS2P1A8MWK0 482 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 HRO43593 1189 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SOD1P00441 154 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 PCCBP05166 539 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ERVK-10P10266 1014 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 GPR1P46091 355 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 MGAT5Q09328 741 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SRSF5Q13243 272 aaKnown RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 NFATC2Q13469 925 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 THOC5Q13769 683 aaKnown RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ATP13A5Q4VNC0 1218 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 FASTKD1Q53R41 847 aaKnown RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ZRANB3Q5FWF4 1079 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SPDYCQ5MJ68 293 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 RAET1GQ6H3X3 334 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 NEPROQ6NW34 567 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 PNCKQ6P2M8 343 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 MICALCLQ6ZW33 695 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SNX20Q7Z614 316 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SLC41A1Q8IVJ1 513 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 LMNTD2Q8IXW0 634 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 TMEFF1Q8IYR6 380 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ABCA7Q8IZY2 2146 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 PELI3Q8N2H9 469 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 DEFB119Q8N690 84 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 GPR150Q8NGU9 434 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 GABPB2Q8TAK5 448 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ZNF398Q8TD17 642 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 CALML6Q8TD86 181 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 FBF1Q8TES7 1133 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 UBLCP1Q8WVY7 318 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SNX19Q92543 992 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ULK4Q96C45 1275 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 VPS35Q96QK1 796 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 AGAP2Q99490 1192 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ORAI3Q9BRQ5 295 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 FAM167BQ9BTA0 163 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 EPB41L4BQ9H329 900 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ASB8Q9H765 288 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 FZD3Q9NPG1 666 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 MBNL1Q9NR56 388 aaKnown RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SMOXQ9NWM0 555 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 IL1RAPL1Q9NZN1 696 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 DNAH14Q0VDD8 3507 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 SPTBN2O15020 2390 aa13.17□□□□□ -0.3
PDCD11-202ENST00000466959 A0A087WUV0 522 aaPredicted RBP13.16□□□□□ -0.3
PDCD11-202ENST00000466959 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 AGAP14A8MT82 685 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 GOLGA8KD6RF30 607 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 PRAMEF26H0Y7S4 382 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 K7ESM1 405 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 FPGTO14772 594 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 CD3EAPO15446 510 aaKnown RBP13.16□□□□□ -0.3
PDCD11-202ENST00000466959 UGT1A9O60656 530 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 LILRB5O75023 590 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
PDCD11-202ENST00000466959 UGT1A6P19224 532 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 UGT1A1P22309 533 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 UGT1A4P22310 534 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 CD27P26842 260 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 UGT1A3P35503 534 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 UGT1A5P35504 534 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 HSD17B3P37058 310 aa13.16□□□□□ -0.3
PDCD11-202ENST00000466959 SMAD1Q15797 465 aaKnown RBP13.16□□□□□ -0.3
PDCD11-202ENST00000466959 UAP1Q16222 522 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms