RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PLA2G15Q8NCC3 412 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 CEP76Q8TAP6 659 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 PYROXD1Q8WU10 500 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 BTN2A2Q8WVV5 523 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ATOH1Q92858 354 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-205ENST00000466897 HDAC10Q969S8 669 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 SKA1Q96BD8 255 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ULK4Q96C45 1275 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 FAM122AQ96E09 287 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 COX14Q96I36 57 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 FCRL3Q96P31 734 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-205ENST00000466897 WDR26Q9H7D7 661 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 PLAC1Q9HBJ0 212 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 SLC30A1Q9Y6M5 507 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 CCDC78A2IDD5 438 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 CCDC162PA2VCL2 907 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 SPAG6O75602 509 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 GOT2P00505 430 aaKnown RBP15.08■□□□□ 0
NPHP4-205ENST00000466897 MYCLP1P12525 358 aaPredicted RBP15.08■□□□□ 0
NPHP4-205ENST00000466897 TMPRSS15P98073 1019 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 NHLH1Q02575 133 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 TEAD4Q15561 434 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 LONRF1Q17RB8 773 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 CERS6Q6ZMG9 384 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 CCNI2Q6ZMN8 369 aaPredicted RBP15.08■□□□□ 0
NPHP4-205ENST00000466897 UNC5AQ6ZN44 842 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 HEATR4Q86WZ0 1026 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 PHYKPLQ8IUZ5 450 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 DDHD1Q8NEL9 900 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 GPR150Q8NGU9 434 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 OR4L1Q8NH43 312 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 GSDMBQ8TAX9 411 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 ZNF398Q8TD17 642 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 GLYATL1Q969I3 302 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 HIC2Q96JB3 615 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 TTC25Q96NG3 672 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 AGAP2Q99490 1192 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 MYOCQ99972 504 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 APOOQ9BUR5 198 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 MIR1-1HGQ9H1L0 117 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 ASB8Q9H765 288 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 AASDHPPTQ9NRN7 309 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 PHPT1Q9NRX4 125 aaPredicted RBP15.08■□□□□ 0
NPHP4-205ENST00000466897 RAB21Q9UL25 225 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 CNOT6Q9ULM6 557 aaKnown RBP15.08■□□□□ 0
NPHP4-205ENST00000466897 SLCO1B1Q9Y6L6 691 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 PIKFYVEQ9Y2I7 2098 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 GON4LQ3T8J9 2241 aa15.08■□□□□ 0
NPHP4-205ENST00000466897 ZFC3H1O60293 1989 aaKnown RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 MUC6Q6W4X9 2439 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 GOLGA8CPA6NN73 597 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 GPR89AB7ZAQ6 455 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 PROB1E7EW31 1015 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 H0Y8X5 98 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 CACNB4O00305 520 aaPredicted RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 CCL22O00626 93 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 VAPBO95292 243 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 GPR89BP0CG08 455 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 KELP23276 732 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 CLDN2P57739 230 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 VSNL1P62760 191 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 PTK2BQ14289 1009 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 NFATC4Q14934 902 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 DUOXA1Q1HG43 343 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 AARS2Q5JTZ9 985 aaKnown RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 LDLRAP1Q5SW96 308 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 LYPLAL1Q5VWZ2 237 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 CES3Q6UWW8 571 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 MACC1Q6ZN28 852 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 Q6ZSR6 202 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 CCDC25Q86WR0 208 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 ANKMY2Q8IV38 441 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 NXPE1Q8N323 547 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 GABPB2Q8TAK5 448 aaPredicted RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 CALML6Q8TD86 181 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 HEXDCQ8WVB3 486 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.07■□□□□ 0
NPHP4-205ENST00000466897 FUBP1Q96AE4 644 aaKnown RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 KLHDC7BQ96G42 594 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 TRIM56Q9BRZ2 755 aaKnown RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 SUDS3Q9H7L9 328 aaPredicted RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 TMEM74BQ9NUR3 256 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 VPS18Q9P253 973 aa15.07■□□□□ 0
NPHP4-205ENST00000466897 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.07■□□□□ 0
NPHP4-205ENST00000466897 V9GYY5 206 aaPredicted RBP15.07■□□□□ 0
NPHP4-205ENST00000466897 ADAMTS9Q9P2N4 1935 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 IGLV3-16A0A075B6K0 115 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 TNFRSF10CO14798 259 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 WNT1P04628 370 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 RETP07949 1114 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 THEGLP0DJG4 465 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 MYBL2P10244 700 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 OGNP20774 298 aaKnown RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 ACRV1P26436 265 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 HTR1BP28222 390 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 PPARGP37231 505 aaPredicted RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 MPLP40238 635 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 ITIH4Q14624 930 aa15.06■□□□□ 0
NPHP4-205ENST00000466897 FASTKD1Q53R41 847 aaKnown RBP15.06■□□□□ 0
NPHP4-205ENST00000466897 PLA2G2CQ5R387 149 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms