RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 CDK16Q00536 496 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 CKAP4Q07065 602 aaKnown RBP13.79□□□□□ -0.2
UBA3-209ENST00000466763 MSLNQ13421 630 aaPredicted RBP13.79□□□□□ -0.2
UBA3-209ENST00000466763 PTK6Q13882 451 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 TPSAB1Q15661 275 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 INAVAQ3KP66 663 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 PRRT3Q5FWE3 981 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 ZNF648Q5T619 568 aaPredicted RBP13.79□□□□□ -0.2
UBA3-209ENST00000466763 JAMLQ86YT9 394 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 SPNS2Q8IVW8 549 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 NAXDQ8IW45 347 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 EID2Q8N6I1 236 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 DEFB124Q8NES8 71 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 PPHLN1Q8NEY8 458 aaKnown RBP13.79□□□□□ -0.2
UBA3-209ENST00000466763 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 SAP25Q8TEE9 199 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 CPT1BQ92523 772 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 PDXPQ96GD0 296 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
UBA3-209ENST00000466763 CAMK1GQ96NX5 476 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 TRIM51Q9BSJ1 452 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 RTKNQ9BST9 563 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 TRIM31Q9BZY9 425 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 CARS2Q9HA77 564 aaKnown RBP13.79□□□□□ -0.2
UBA3-209ENST00000466763 UGT1A7Q9HAW7 530 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 UGT1A10Q9HAW8 530 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 UGT1A8Q9HAW9 530 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 UCKL1Q9NWZ5 548 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 BFARQ9NZS9 450 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 SPASTQ9UBP0 616 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 PNMA8BQ9ULN7 279 aaPredicted RBP13.79□□□□□ -0.2
UBA3-209ENST00000466763 DOLKQ9UPQ8 538 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 NEU2Q9Y3R4 380 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 GPSM3Q9Y4H4 160 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
UBA3-209ENST00000466763 SCN8AQ9UQD0 1980 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 PRSS38A1L453 326 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 AP3B1O00203 1094 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 FLRT2O43155 660 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 LDB2O43679 373 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 PCDHGA12O60330 932 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ADRA1DP25100 572 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 MGAT1P26572 445 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 HADHAP40939 763 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 GRK6P43250 576 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ID4P47928 161 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 NPY2RP49146 381 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ZNF140P52738 457 aaPredicted RBP13.78□□□□□ -0.2
UBA3-209ENST00000466763 LAMB3Q13751 1172 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 DHX34Q14147 1143 aaKnown RBP13.78□□□□□ -0.2
UBA3-209ENST00000466763 KCNJ11Q14654 390 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ATP13A5Q4VNC0 1218 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ZRANB3Q5FWF4 1079 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ANKRD22Q5VYY1 191 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 KCTD16Q68DU8 428 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 SYDE1Q6ZW31 735 aaPredicted RBP13.78□□□□□ -0.2
UBA3-209ENST00000466763 PHYKPLQ8IUZ5 450 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ZNF398Q8TD17 642 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 STYXQ8WUJ0 223 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 SLCO2A1Q92959 643 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 GLYATL1Q969I3 302 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 FRMD8Q9BZ67 464 aaPredicted RBP13.78□□□□□ -0.2
UBA3-209ENST00000466763 FAM96AQ9H5X1 160 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 ASB8Q9H765 288 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 NFKBIL1Q9UBC1 381 aaPredicted RBP13.78□□□□□ -0.2
UBA3-209ENST00000466763 APPL1Q9UKG1 709 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 CNOT6Q9ULM6 557 aaKnown RBP13.78□□□□□ -0.2
UBA3-209ENST00000466763 BTBD3Q9Y2F9 522 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 OAS3Q9Y6K5 1087 aaKnown RBP13.78□□□□□ -0.2
UBA3-209ENST00000466763 SLC30A1Q9Y6M5 507 aa13.78□□□□□ -0.2
UBA3-209ENST00000466763 NEMP2A6NFY4 417 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 DNALI1O14645 258 aaPredicted RBP13.77□□□□□ -0.21
UBA3-209ENST00000466763 TNFRSF10CO14798 259 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 GPR39O43194 453 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 AQP9O43315 295 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 MTX2O75431 263 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 TMEM63AO94886 807 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 PRAMEF1O95521 474 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 CEACAM5P06731 702 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 ANXA6P08133 673 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 ALPPL2P10696 532 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 MC4RP32245 332 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 CRADDP78560 199 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 ITGA9Q13797 1035 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 PUM1Q14671 1186 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBA3-209ENST00000466763 SKIDA1Q1XH10 827 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 PCID2Q5JVF3 399 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 PDPK2PQ6A1A2 396 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 CASC4Q6P4E1 433 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 LRRC8BQ6P9F7 803 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 MAATS1Q7Z4T9 603 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 PCGF5Q86SE9 256 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 PPIL6Q8IXY8 311 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 SLC25A45Q8N413 288 aa13.77□□□□□ -0.21
UBA3-209ENST00000466763 ZNF548Q8NEK5 533 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms