RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	DECR1	Q16698	335 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	CCDC96	Q2M329	555 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	AMZ1	Q400G9	498 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TYW3	Q6IPR3	259 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	KRT77	Q7Z794	578 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	KCTD6	Q8NC69	237 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	OR1J2	Q8NGS2	313 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	HM13	Q8TCT9	377 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	APBB2	Q92870	758 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TAAR8	Q969N4	342 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TMCO6	Q96DC7	493 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SF3B5	Q9BWJ5	86 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	C1QTNF7	Q9BXJ2	289 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	DCLK3	Q9C098	648 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	FAM234A	Q9H0X4	552 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	MMP27	Q9H306	513 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	RABEP2	Q9H5N1	569 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PAG1	Q9NWQ8	432 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TRMT1	Q9NXH9	659 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SLC9A2	Q9UBY0	812 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PADI1	Q9ULC6	663 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PLAGL1	Q9UM63	463 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PTGDR2	Q9Y5Y4	395 aa		4.37	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		A0A0U1RQJ8	604 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		A0A1B0GVT2	93 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	hCG_1809904	A0A1W2PP81	198 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		A0A1W2PPE2	198 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		A0A1W2PR64	198 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TCRBV21S2A2	A0A5A6	115 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	LNP1	A1A4G5	178 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		H3BNX3	289 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		H7C0S8	307 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	KCNN4	O15554	427 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SERPINI2	O75830	405 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	CH25H	O95992	272 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	GLUD1	P00367	558 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	GH2	P01242	217 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SRC	P12931	536 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	MMP9	P14780	707 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	BDKRB2	P30411	391 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	GLUD2	P49448	558 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SUOX	P51687	545 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SEC61B	P60468	96 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		Q0VFX4	171 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	CDC16	Q13042	620 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	ODF3L2	Q3SX64	289 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TCP11X2	Q5H9J9	407 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	ZNF425	Q6IV72	752 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	LCN10	Q6JVE6	187 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	DUS1L	Q6P1R4	473 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TPRG1	Q6ZUI0	275 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	IRF2BP2	Q7Z5L9	587 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TECPR1	Q7Z6L1	1165 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	BEST3	Q8N1M1	668 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	GUF1	Q8N442	669 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	OR14A16	Q8NHC5	309 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	OIT3	Q8WWZ8	545 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	DNAAF4	Q8WXU2	420 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	5e-10	■■■■□ 21.3
CDC42BPA-211	ENST00000466538	CNDP2	Q96KP4	475 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	CEP295NL	Q96MC4	621 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PAFAH2	Q99487	392 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SLC29A3	Q9BZD2	475 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	RTN4R	Q9BZR6	473 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	KLHL4	Q9C0H6	718 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PIGM	Q9H3S5	423 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PCDH9	Q9HC56	1237 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TAB2	Q9NYJ8	693 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	GDE1	Q9NZC3	331 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	STK39	Q9UEW8	545 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SQOR	Q9Y6N5	450 aa		4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	LOC102723996	A0A087X1L8	192 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	GPR75-ASB3	A0A0A6YYF3	556 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	EIF4E1B	A6NMX2	242 aa	Known RBP	4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538		H3BQ06	376 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	UBE2C	O00762	179 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PLRG1	O43660	514 aa	Known RBP	4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	NDUFS7	O75251	213 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	EGF	P01133	1207 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	ABCB1	P08183	1280 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	UGT1A1	P22309	533 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	C21orf33	P30042	268 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	CAPZA2	P47755	286 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	PSMD6	Q15008	389 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	CTF1	Q16619	201 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	KYNU	Q16719	465 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	MYLK3	Q32MK0	819 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	CRY2	Q49AN0	593 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	IGSF11	Q5DX21	431 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	C9orf152	Q5JTZ5	239 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	SPECC1	Q5M775	1068 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	FAM69B	Q5VUD6	431 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	TMEM198	Q66K66	360 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	ADAL	Q6DHV7	355 aa		4.35	□□□□□ -1.71
CDC42BPA-211	ENST00000466538	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.35	□□□□□ -1.71

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