RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SH2D4BQ5SQS7 431 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SYCP2LQ5T4T6 812 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ATXN7L2Q5T6C5 722 aaPredicted RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 LRRC8BQ6P9F7 803 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 FBXL19Q6PCT2 694 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 GDPD4Q6W3E5 623 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 FAM124AQ86V42 546 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ZC3H18Q86VM9 953 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 ANKMY2Q8IV38 441 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 NDUFAF2Q8N183 169 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 AFAP1L2Q8N4X5 818 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 NETO2Q8NC67 525 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 PIWIL2Q8TC59 973 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 MZB1Q8WU39 189 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 FOXJ1Q92949 421 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 RAB7BQ96AH8 199 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 DTNBP1Q96EV8 351 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 EXOC2Q96KP1 924 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ZNF641Q96N77 438 aaPredicted RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 RILPQ96NA2 401 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 FAM129BQ96TA1 746 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 LGMNQ99538 433 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ZNF184Q99676 751 aaPredicted RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 CPNE1Q99829 537 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SH3GL3Q99963 347 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 CPEB1Q9BZB8 566 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 SLC6A17Q9H1V8 727 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 MRM3Q9HC36 420 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 VCX3AQ9NNX9 186 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 NT5MQ9NPB1 228 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 RBM22Q9NW64 420 aaKnown RBP eCLIP10.01□□□□□ -0.81
PMF1-204ENST00000466489 SEPT10Q9P0V9 454 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 USP36Q9P275 1121 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 LHX3Q9UBR4 397 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 VTI1BQ9UEU0 232 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 GMEB2Q9UKD1 530 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 PPM1HQ9ULR3 514 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SOX13Q9UN79 622 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 R4GN57 208 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 A0A1W2PP55 124 aa10□□□□□ -0.81
PMF1-204ENST00000466489 A6NHS1 94 aa10□□□□□ -0.81
PMF1-204ENST00000466489 MEI4A8MW99 385 aa10□□□□□ -0.81
PMF1-204ENST00000466489 TMEM114B3SHH9 223 aa10□□□□□ -0.81
PMF1-204ENST00000466489 NEMP1O14524 444 aa10□□□□□ -0.81
PMF1-204ENST00000466489 AHCYL1O43865 530 aa10□□□□□ -0.81
PMF1-204ENST00000466489 PEX1O43933 1283 aa10□□□□□ -0.81
PMF1-204ENST00000466489 LILRB5O75023 590 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SOCS5O75159 536 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SMNDC1O75940 238 aaKnown RBP eCLIP10□□□□□ -0.81
PMF1-204ENST00000466489 SEMA4FO95754 770 aa10□□□□□ -0.81
PMF1-204ENST00000466489 CD160O95971 181 aa10□□□□□ -0.81
PMF1-204ENST00000466489 IGLV3-19P01714 112 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SERPINE1P05121 402 aa10□□□□□ -0.81
PMF1-204ENST00000466489 UGT2B4P06133 528 aa10□□□□□ -0.81
PMF1-204ENST00000466489 FESP07332 822 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SERPINF2P08697 491 aa10□□□□□ -0.81
PMF1-204ENST00000466489 ZSCAN5DPP0CG00 497 aa10□□□□□ -0.81
PMF1-204ENST00000466489 T-ENOLP0DO92 83 aa10□□□□□ -0.81
PMF1-204ENST00000466489 C7P10643 843 aa10□□□□□ -0.81
PMF1-204ENST00000466489 PYGBP11216 843 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SPRP35270 261 aaPredicted RBP10□□□□□ -0.81
PMF1-204ENST00000466489 NBL1P41271 181 aa10□□□□□ -0.81
PMF1-204ENST00000466489 MAGEA3P43357 314 aa10□□□□□ -0.81
PMF1-204ENST00000466489 NPY2RP49146 381 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SUOXP51687 545 aa10□□□□□ -0.81
PMF1-204ENST00000466489 PDE1BQ01064 536 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SLC10A2Q12908 348 aaPredicted RBP10□□□□□ -0.81
PMF1-204ENST00000466489 ADRM1Q16186 407 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SPRED3Q2MJR0 410 aa10□□□□□ -0.81
PMF1-204ENST00000466489 MAP7D1Q3KQU3 841 aa10□□□□□ -0.81
PMF1-204ENST00000466489 HSP90AA5PQ58FG0 334 aa10□□□□□ -0.81
PMF1-204ENST00000466489 WDR45BQ5MNZ6 344 aa10□□□□□ -0.81
PMF1-204ENST00000466489 FNBP1LQ5T0N5 605 aa10□□□□□ -0.81
PMF1-204ENST00000466489 ITPRIPL1Q6GPH6 555 aa10□□□□□ -0.81
PMF1-204ENST00000466489 CGB2Q6NT52 195 aa10□□□□□ -0.81
PMF1-204ENST00000466489 ZFP1Q6P2D0 407 aa10□□□□□ -0.81
PMF1-204ENST00000466489 BRAT1Q6PJG6 821 aa10□□□□□ -0.81
PMF1-204ENST00000466489 NPNTQ6UXI9 565 aa10□□□□□ -0.81
PMF1-204ENST00000466489 ERN2Q76MJ5 926 aaKnown RBP10□□□□□ -0.81
PMF1-204ENST00000466489 MARK2Q7KZI7 788 aaKnown RBP10□□□□□ -0.81
PMF1-204ENST00000466489 LINC00523Q86TU6 105 aa10□□□□□ -0.81
PMF1-204ENST00000466489 SCUBE1Q8IWY4 988 aa10□□□□□ -0.81
PMF1-204ENST00000466489 TP53INP2Q8IXH6 220 aa10□□□□□ -0.81
PMF1-204ENST00000466489 ALDH16A1Q8IZ83 802 aa10□□□□□ -0.81
PMF1-204ENST00000466489 KIF2BQ8N4N8 673 aa10□□□□□ -0.81
PMF1-204ENST00000466489 PPM1NQ8N819 430 aa10□□□□□ -0.81
PMF1-204ENST00000466489 CHST14Q8NCH0 376 aa10□□□□□ -0.81
PMF1-204ENST00000466489 OR6K2Q8NGY2 324 aa10□□□□□ -0.81
PMF1-204ENST00000466489 OR14C36Q8NHC7 312 aa10□□□□□ -0.81
PMF1-204ENST00000466489 HCAR2Q8TDS4 363 aa10□□□□□ -0.81
PMF1-204ENST00000466489 ZFAND2BQ8WV99 257 aa10□□□□□ -0.81
PMF1-204ENST00000466489 RLN3Q8WXF3 142 aa10□□□□□ -0.81
PMF1-204ENST00000466489 TOE1Q96GM8 510 aaKnown RBP10□□□□□ -0.81
PMF1-204ENST00000466489 QKIQ96PU8 341 aaKnown RBP eCLIP10□□□□□ -0.81
PMF1-204ENST00000466489 MGME1Q9BQP7 344 aa10□□□□□ -0.81
PMF1-204ENST00000466489 CENPKQ9BS16 269 aa10□□□□□ -0.81
PMF1-204ENST00000466489 HERPUD2Q9BSE4 406 aa10□□□□□ -0.81
PMF1-204ENST00000466489 TMEM120AQ9BXJ8 343 aa10□□□□□ -0.81
PMF1-204ENST00000466489 HDAC8Q9BY41 377 aa10□□□□□ -0.81
PMF1-204ENST00000466489 DENND2DQ9H6A0 471 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms