RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CHST9Q7L1S5 443 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 HIST3H2AQ7L7L0 130 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 TSPAN33Q86UF1 283 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 CHERPQ8IWX8 916 aaKnown RBP4.26□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF114Q8NC26 417 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 C1orf131Q8NDD1 294 aaKnown RBP4.26□□□□□ -1.73
LRCH3-211ENST00000466054 TMED6Q8WW62 240 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 WBP2Q969T9 261 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 MOAP1Q96BY2 351 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 FAM120BQ96EK7 910 aaKnown RBP4.26□□□□□ -1.73
LRCH3-211ENST00000466054 FIZ1Q96SL8 496 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 C1QTNF1Q9BXJ1 281 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 FTOQ9C0B1 505 aaKnown RBP eCLIP4.26□□□□□ -1.73
LRCH3-211ENST00000466054 SIL1Q9H173 461 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 SMARCAD1Q9H4L7 1026 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 C6orf106Q9H6K1 298 aaPredicted RBP4.26□□□□□ -1.73
LRCH3-211ENST00000466054 HAUS2Q9NVX0 235 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 SMARCAL1Q9NZC9 954 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 VPS28Q9UK41 221 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 FBXW11Q9UKB1 542 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 PCDHGB1Q9Y5G3 927 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 KANSL1LA0AUZ9 987 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 AGAP14A8MT82 685 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 SPINT2O43291 252 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 HS6ST1O60243 411 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 TSPAN9O75954 239 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 EGFP01133 1207 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 SRPRAP08240 638 aaKnown RBP4.25□□□□□ -1.73
LRCH3-211ENST00000466054 BDKRB2P30411 391 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 SSTR2P30874 369 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 HADHAP40939 763 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 DSCR9P59020 149 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 MC1RQ01726 317 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 CREB5Q02930 508 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 DDR1Q08345 913 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 KIF5AQ12840 1032 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 ACVR2BQ13705 512 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 PNLIPRP3Q17RR3 467 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 ASTE1Q2TB18 679 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-211ENST00000466054 PLEKHS1Q5SXH7 462 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 PMS2CLQ68D20 193 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 CFAP161Q6P656 301 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 CCNI2Q6ZMN8 369 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-211ENST00000466054 PGBD5Q8N414 524 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 TRPC4APQ8TEL6 797 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 RTP4Q96DX8 246 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 SCMH1Q96GD3 660 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF385AQ96PM9 386 aaKnown RBP4.25□□□□□ -1.73
LRCH3-211ENST00000466054 OR2A14Q96R47 310 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 SPRY4Q9C004 299 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 IL25Q9H293 177 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 CCDC68Q9H2F9 335 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 NOX4Q9NPH5 578 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 OCIAD1Q9NX40 245 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 OR14J1Q9UGF5 321 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 GPR34Q9UPC5 381 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 SNX9Q9Y5X1 595 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 CLIC4Q9Y696 253 aa4.25□□□□□ -1.73
LRCH3-211ENST00000466054 TRIP12Q14669 1992 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-211ENST00000466054 RSF1Q96T23 1441 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 C1orf226A1L170 272 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 K7ENM7 598 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 M0QZ24 198 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 GPC4O75487 556 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 RB1P06400 928 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 CLTBP09497 229 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 GABRB1P18505 474 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 TCEA1P23193 301 aaKnown RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 ACADLP28330 430 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 GARSP41250 739 aaKnown RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 CAMPP49913 170 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 MYBPHQ13203 477 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 MAD2L1Q13257 205 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 CUL4AQ13619 759 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 TNFAIP1Q13829 316 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 DECR1Q16698 335 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 SETMARQ53H47 684 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF805Q5CZA5 627 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 PAPPA-AS1Q5QFB9 102 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 DUS1LQ6P1R4 473 aaKnown RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 WDR73Q6P4I2 378 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 RHBDF2Q6PJF5 856 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 CLEC4GQ6UXB4 293 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 CFAP77Q6ZQR2 320 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 EPHX4Q8IUS5 362 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 BEST3Q8N1M1 668 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 RND1Q92730 232 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 APBB2Q92870 758 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 ZKSCAN4Q969J2 545 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 TAAR8Q969N4 342 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 MTMR10Q9NXD2 777 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 C1RLQ9NZP8 487 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 OGFRQ9NZT2 677 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 COPG2Q9UBF2 871 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 FBXL17Q9UF56 701 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 TBC1D29Q9UFV1 150 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 SIX4Q9UIU6 781 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF215Q9UL58 517 aaPredicted RBP4.24□□□□□ -1.73
LRCH3-211ENST00000466054 LOXL2Q9Y4K0 774 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms