RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 FAM83AQ86UY5 434 aa13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 MFSD4AQ8N468 514 aa13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 CHDHQ8NE62 594 aaPredicted RBP13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 RPL3LQ92901 407 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 CGREF1Q99674 301 aa13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 YTHDF1Q9BYJ9 559 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 AMBRA1Q9C0C7 1298 aa13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 TUBB1Q9H4B7 451 aa13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 GMIPQ9P107 970 aa13.88□□□□□ -0.19
TGFBR3-204ENST00000465892 ASPDHA6ND91 283 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 CNTN5O94779 1100 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 CDK14O94921 469 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 ALOX5P09917 674 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 ADRA1BP35368 520 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 BMPR1AP36894 532 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 MTPNP58546 118 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 UFM1P61960 85 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 IL1RL1Q01638 556 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 DAG1Q14118 895 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 ARL13BQ3SXY8 428 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 ZNF678Q5SXM1 525 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 CLYBLQ8N0X4 340 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 PPM1MQ96MI6 270 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 CAMKK2Q96RR4 588 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 A0A087X1B8 175 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 SYCE1LA8MT33 242 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 H0YAE9 185 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 SNPHO15079 494 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 TBX1O43435 398 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 IMPDH1P20839 514 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 TXNDC11Q6PKC3 985 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 TAS2R42Q7RTR8 314 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 DCP1BQ8IZD4 617 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 FBXO30Q8TB52 745 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 EDEM1Q92611 657 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 EFHD2Q96C19 240 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 CLIP3Q96DZ5 547 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 OTUD5Q96G74 571 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 DACH2Q96NX9 599 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 NODALQ96S42 347 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 GMLQ99445 158 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 TBL1YQ9BQ87 522 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 RHNO1Q9BSD3 238 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 FAM118AQ9NWS6 357 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 SNTG2Q9NY99 539 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 RCOR3Q9P2K3 495 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 COL11A2P13942 1736 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 OR51F1A6NGY5 319 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 BBIP1A8MTZ0 92 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 AGRPO00253 132 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 UPK1AO00322 258 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 SEC24AO95486 1093 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 C7P10643 843 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 ICAM3P32942 547 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 EMX1Q04741 257 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 CAMK2BQ13554 666 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 AAK1Q2M2I8 961 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 NBPF12Q5TAG4 269 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 IRAK1BP1Q5VVH5 260 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 PRMT9Q6P2P2 845 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 SLC22A15Q8IZD6 547 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 PTGR2Q8N8N7 351 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 POC5Q8NA72 575 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 PPHLN1Q8NEY8 458 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 OR10Q1Q8NGQ4 319 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 FRS2Q8WU20 508 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 OSCP1Q8WVF1 389 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 STON2Q8WXE9 905 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 PTERQ96BW5 349 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 NSMCE2Q96MF7 247 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 TRIT1Q9H3H1 467 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 SEMA4BQ9NPR2 832 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 POLG2Q9UHN1 485 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 IFT52Q9Y366 437 aa13.87□□□□□ -0.19
TGFBR3-204ENST00000465892 IGKV6-21A0A0C4DH24 114 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 CCDC162PA2VCL2 907 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 C16orf96A6NNT2 1141 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 ERI2A8K979 691 aaKnown RBP13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 DEAF1O75398 565 aaPredicted RBP13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 SPNP16150 400 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 KPNA2P52292 529 aaKnown RBP13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 CDKN2DP55273 166 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 KCNK10P57789 538 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 KCNAB2Q13303 367 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 SELPLGQ14242 412 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 LAIR2Q6ISS4 152 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 SPESP1Q6UW49 350 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 PDZD4Q76G19 769 aaPredicted RBP13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 TFAP2DQ7Z6R9 452 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 ZDHHC13Q8IUH4 622 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■■■■ 41.3
TGFBR3-204ENST00000465892 SIK2Q9H0K1 926 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 GOLGA2P5Q9HBQ8 144 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 PRMT7Q9NVM4 692 aaPredicted RBP13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 CSADQ9Y600 493 aa13.86□□□□□ -0.19
TGFBR3-204ENST00000465892 PSME4Q14997 1843 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms