RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 WDR74Q6RFH5 385 aaPredicted RBP12.72□□□□□ -0.37
SRM-203ENST00000465788 ATG14Q6ZNE5 492 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 PRICKLE2Q7Z3G6 844 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 VASH2Q86V25 355 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 RCBTB1Q8NDN9 531 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 SLC37A2Q8TED4 501 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 PATE1Q8WXA2 126 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 CTNNBL1Q8WYA6 563 aaPredicted RBP12.72□□□□□ -0.37
SRM-203ENST00000465788 SCAMP4Q969E2 229 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 HDAC11Q96DB2 347 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 SRPK1Q96SB4 655 aaKnown RBP12.72□□□□□ -0.37
SRM-203ENST00000465788 RIOK2Q9BVS4 552 aaKnown RBP12.72□□□□□ -0.37
SRM-203ENST00000465788 TRIT1Q9H3H1 467 aaKnown RBP12.72□□□□□ -0.37
SRM-203ENST00000465788 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 ZNHIT2Q9UHR6 403 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 CHKBQ9Y259 395 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 TMEM98Q9Y2Y6 226 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 TTLL3Q9Y4R7 772 aa12.72□□□□□ -0.37
SRM-203ENST00000465788 A0A087X0T9 212 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 C1orf232A0A0U1RR37 186 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 H2AFZP0C0S5 128 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 FAM228BP0C875 321 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 PBX1P40424 430 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 SPINT3P49223 89 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 CLCNKAP51800 687 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 DSC2Q02487 901 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 MMRN1Q13201 1228 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 TBR1Q16650 682 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.71□□□□□ -0.37
SRM-203ENST00000465788 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 PDPK2PQ6A1A2 396 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 H2AFVQ71UI9 128 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 MARK2Q7KZI7 788 aaKnown RBP12.71□□□□□ -0.37
SRM-203ENST00000465788 LYSMD3Q7Z3D4 306 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 VSIG1Q86XK7 387 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 CCDC13Q8IYE1 715 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 CACNA2D3Q8IZS8 1091 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 LPCAT1Q8NF37 534 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 ART4Q93070 314 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 NKD1Q969G9 470 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 KIAA1143Q96AT1 154 aaPredicted RBP12.71□□□□□ -0.37
SRM-203ENST00000465788 FAF2Q96CS3 445 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 BTBD6Q96KE9 485 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 MLPHQ9BV36 600 aaPredicted RBP12.71□□□□□ -0.37
SRM-203ENST00000465788 CARD9Q9H257 536 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 FAM83DQ9H4H8 585 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 GEMIN8Q9NWZ8 242 aaKnown RBP12.71□□□□□ -0.37
SRM-203ENST00000465788 CTTNBP2NLQ9P2B4 639 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 TUBD1Q9UJT1 453 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.71□□□□□ -0.37
SRM-203ENST00000465788 ST14Q9Y5Y6 855 aa12.71□□□□□ -0.37
SRM-203ENST00000465788 ZNF891A8MT65 544 aaPredicted RBP12.7□□□□□ -0.38
SRM-203ENST00000465788 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 INPP4BO15327 924 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 DNAJC6O75061 913 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 CLDN7O95471 211 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 CD48P09326 243 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 MAP4P27816 1152 aaKnown RBP12.7□□□□□ -0.38
SRM-203ENST00000465788 CSF2RBP32927 897 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 UGT1A3P35503 534 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 MC1RQ01726 317 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 SLC14A2Q15849 920 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 HENMT1Q5T8I9 393 aaKnown RBP12.7□□□□□ -0.38
SRM-203ENST00000465788 NKAIN2Q5VXU1 208 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 BORAQ6PGQ7 559 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 FAM129CQ86XR2 697 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 PHYKPLQ8IUZ5 450 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 CCNYQ8ND76 341 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 ARRDC2Q8TBH0 407 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
SRM-203ENST00000465788 ZSCAN5AQ9BUG6 496 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 SLC12A9Q9BXP2 914 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 XPO4Q9C0E2 1151 aaKnown RBP12.7□□□□□ -0.38
SRM-203ENST00000465788 NFKBIL1Q9UBC1 381 aaPredicted RBP12.7□□□□□ -0.38
SRM-203ENST00000465788 B3GALT1Q9Y5Z6 326 aa12.7□□□□□ -0.38
SRM-203ENST00000465788 TENM4Q6N022 2769 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 LILRA5A6NI73 299 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 EFCAB7A8K855 629 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 AGRPO00253 132 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 RAD1O60671 282 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 MAP3K6O95382 1288 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 PRLP01236 227 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 HLA-DQB2P05538 268 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 FAM87AP0C7U9 286 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 F3P13726 295 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 ZFXP17010 805 aaPredicted RBP12.69□□□□□ -0.38
SRM-203ENST00000465788 GJC1P36383 396 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 DCDC1P59894 354 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 IFI35P80217 286 aaPredicted RBP12.69□□□□□ -0.38
SRM-203ENST00000465788 MC2RQ01718 297 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
SRM-203ENST00000465788 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 RFLNAQ6ZTI6 216 aa12.69□□□□□ -0.38
SRM-203ENST00000465788 CHST15Q7LFX5 561 aaPredicted RBP12.69□□□□□ -0.38
SRM-203ENST00000465788 ARHGAP22Q7Z5H3 698 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms