RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PPHLN1Q8NEY8 458 aaKnown RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 MZB1Q8WU39 189 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 OXNAD1Q96HP4 312 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 POLR1EQ9GZS1 481 aaKnown RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 PLAC1Q9HBJ0 212 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 ARNT2Q9HBZ2 717 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 PPANQ9NQ55 473 aaKnown RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 TXNDC16Q9P2K2 825 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 SOX13Q9UN79 622 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 RPS6KL1Q9Y6S9 549 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 FAM169AQ9Y6X4 670 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 AHCTF1Q8WYP5 2266 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 DOCK4Q8N1I0 1966 aa13.83□□□□□ -0.19
HDAC6-215ENST00000465457 USP9XQ93008 2570 aaPredicted RBP13.83□□□□□ -0.19
HDAC6-215ENST00000465457 RELNP78509 3460 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 F5H423 210 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 C1SP09871 688 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 C7P10643 843 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 KRT4P19013 534 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 CA4P22748 312 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 HLA-FP30511 346 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 SLC6A4P31645 630 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 PCBP4P57723 403 aaKnown RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 RACK1P63244 317 aaKnown RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 NIPAL4Q0D2K0 466 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF235Q14590 738 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 LBRQ14739 615 aaKnown RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 EIF4HQ15056 248 aaKnown RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 SEPT7Q16181 437 aaKnown RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 FNDC3BQ53EP0 1204 aaKnown RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 PCID2Q5JVF3 399 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 TIFABQ6ZNK6 161 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 MICALCLQ6ZW33 695 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 FAM217AQ8IXS0 508 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF248Q8NDW4 579 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 ACMSDQ8TDX5 336 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 CKAP2Q8WWK9 683 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 CERS2Q96G23 380 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 WBP1Q96G27 269 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 APOPT1Q96IL0 206 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 KIFC1Q9BW19 673 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 PRSS16Q9NQE7 514 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 ZFATQ9P243 1243 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 SEPT3Q9UH03 358 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 AGO1Q9UL18 857 aaKnown RBP13.83□□□□□ -0.2
HDAC6-215ENST00000465457 TBC1D30Q9Y2I9 924 aa13.83□□□□□ -0.2
HDAC6-215ENST00000465457 NBPF19A0A087WUL8 3843 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 GOLGA6L7A0A1B0GV03 622 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 A0A1W2PPC4 97 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 A0A1W2PR77 199 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 KDELR3O43731 214 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 TYROBPO43914 113 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 RHOCP08134 193 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 PAMP19021 973 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 HOXD9P28356 352 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-215ENST00000465457 ADRA1AP35348 466 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 HADHAP40939 763 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 OXCT1P55809 520 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 ANKRD20A4Q4UJ75 823 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 PDPK2PQ6A1A2 396 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 ALG1LQ6GMV1 187 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 NCEH1Q6PIU2 408 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 RGS9BPQ6ZS82 235 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 NLRP9Q7RTR0 991 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 CPLX4Q7Z7G2 160 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
HDAC6-215ENST00000465457 ANKRD42Q8N9B4 389 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 BANPQ8N9N5 519 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 IPMKQ8NFU5 416 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF669Q96BR6 464 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-215ENST00000465457 MRRFQ96E11 262 aaKnown RBP13.82□□□□□ -0.2
HDAC6-215ENST00000465457 MAGEB18Q96M61 343 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 PRICKLE1Q96MT3 831 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-215ENST00000465457 RANBP9Q96S59 729 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 CCT8L2Q96SF2 557 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 CPNE1Q99829 537 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 FICDQ9BVA6 458 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 IQCGQ9H095 443 aaKnown RBP13.82□□□□□ -0.2
HDAC6-215ENST00000465457 PDFQ9HBH1 243 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 NT5MQ9NPB1 228 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 AASDHPPTQ9NRN7 309 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 LRRK2Q5S007 2527 aa13.82□□□□□ -0.2
HDAC6-215ENST00000465457 CXorf51AA0A1B0GTR3 108 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 J3KR12 359 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 EBAG9O00559 213 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 KLK10O43240 276 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 SDC3O75056 442 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 EPOP01588 193 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 DNTTP04053 509 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 ADRA1DP25100 572 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 GP5P40197 560 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 CCNFP41002 786 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 CSE1LP55060 971 aaKnown RBP13.81□□□□□ -0.2
HDAC6-215ENST00000465457 WNT3AP56704 352 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 NFKB2Q00653 900 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 SLC18A2Q05940 514 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 UGP2Q16851 508 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 COLEC12Q5KU26 742 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 MPP7Q5T2T1 576 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms