RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ABI3BPQ7Z7G0 1075 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 FAM174AQ8TBP5 190 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 BRSK1Q8TDC3 778 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 FOXP3Q9BZS1 431 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 IL22Q9GZX6 179 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 CAAP1Q9H8G2 361 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 ZFYVE1Q9HBF4 777 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 PKD2L2Q9NZM6 624 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 B4GALT6Q9UBX8 382 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 PKP3Q9Y446 797 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 DOCK9Q9BZ29 2069 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 C1orf232A0A0U1RR37 186 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 HEATR9A2RTY3 570 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 LZTS3O60299 673 aaPredicted RBP17.38■□□□□ 0.37
CPSF4-209ENST00000465132 TM7SF2O76062 418 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 SEC31AO94979 1220 aaKnown RBP17.38■□□□□ 0.37
CPSF4-209ENST00000465132 CKMT1AP12532 417 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 ABL2P42684 1182 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 TMEM259Q4ZIN3 620 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 DNAJC21Q5F1R6 531 aaKnown RBP17.38■□□□□ 0.37
CPSF4-209ENST00000465132 KDM7AQ6ZMT4 941 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 GLT6D1Q7Z4J2 308 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 PRUNE1Q86TP1 453 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 PDIK1LQ8N165 341 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 SLC22A18ASQ8N1D0 253 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 BLOC1S5Q8TDH9 187 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
CPSF4-209ENST00000465132 CPT1BQ92523 772 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 VOPP1Q96AW1 172 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 GORASP1Q9BQQ3 440 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 LRRC1Q9BTT6 524 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 CASS4Q9NQ75 786 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 SAMD15Q9P1V8 674 aa17.38■□□□□ 0.37
CPSF4-209ENST00000465132 MYLKQ15746 1914 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 TOR1BO14657 336 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 HEXIM1O94992 359 aaKnown RBP17.37■□□□□ 0.37
CPSF4-209ENST00000465132 CTPS1P17812 591 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 HMGCLP35914 325 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 HADHAP40939 763 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 LIG3P49916 1009 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 SPARCL1Q14515 664 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 TAF1AQ15573 450 aaPredicted RBP17.37■□□□□ 0.37
CPSF4-209ENST00000465132 TBC1D25Q3MII6 688 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 RNASEH2BQ5TBB1 312 aaKnown RBP17.37■□□□□ 0.37
CPSF4-209ENST00000465132 DUPD1Q68J44 220 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 Q6ZSR6 202 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 ZSWIM9Q86XI8 627 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 CCNJLQ8IV13 435 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 IFT20Q8IY31 132 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 NRSN1Q8IZ57 195 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 NAT8LQ8N9F0 302 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 PPHLN1Q8NEY8 458 aaKnown RBP17.37■□□□□ 0.37
CPSF4-209ENST00000465132 PEX13Q92968 403 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 NSMCE3Q96MG7 304 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 TRIM51Q9BSJ1 452 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 NAT9Q9BTE0 207 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 SLC17A9Q9BYT1 436 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 TRIM31Q9BZY9 425 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 NLGN3Q9NZ94 848 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 ZNF711Q9Y462 761 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 HS3ST3A1Q9Y663 406 aa17.37■□□□□ 0.37
CPSF4-209ENST00000465132 NPIPB15A6NHN6 443 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 A6NNZ2 444 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 TK2O00142 265 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 ATXN7O15265 892 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 OPA1O60313 960 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 USP12O75317 370 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 ALPIP09923 528 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 ALPPL2P10696 532 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 LPOP22079 712 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 ADRA1DP25100 572 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 ARL4CP56559 192 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 IHHQ14623 411 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 ACOX1Q15067 660 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 AGERQ15109 404 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 SKIDA1Q1XH10 827 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 CDCP2Q5VXM1 449 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 LRRC66Q68CR7 880 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 CRTC1Q6UUV9 634 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 LIPIQ6XZB0 460 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 DCP2Q8IU60 420 aaKnown RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 DENND6BQ8NEG7 585 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 OR52K1Q8NGK4 314 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 GABPB2Q8TAK5 448 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 LRRC39Q96DD0 335 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 BMFQ96LC9 184 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 APOLD1Q96LR9 279 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 FCRL3Q96P31 734 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 RANBP9Q96S59 729 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 APOL2Q9BQE5 337 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 WRAP53Q9BUR4 548 aaKnown RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 C1QTNF2Q9BXJ5 285 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 GPR27Q9NS67 375 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 MTRF1LQ9UGC7 380 aaKnown RBP17.36■□□□□ 0.37
CPSF4-209ENST00000465132 SNX24Q9Y343 169 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 PCDHB1Q9Y5F3 818 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 TRPM6Q9BX84 2022 aa17.36■□□□□ 0.37
CPSF4-209ENST00000465132 NEMP2A6NFY4 417 aa17.35■□□□□ 0.37
CPSF4-209ENST00000465132 SDR42E2A6NKP2 422 aa17.35■□□□□ 0.37
CPSF4-209ENST00000465132 SCAMP1O15126 338 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms