RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 UNC79Q9P2D8 2635 aa14.33□□□□□ -0.11
SMC1A-204ENST00000463684 OR5K4A6NMS3 321 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 KIAA0754O94854 1291 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 NDUFA10O95299 355 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 PGLSO95336 258 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 MT-ND3P03897 115 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 PDGFAP04085 211 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 TPM2P07951 284 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 F3P13726 295 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 TNFAIP3P21580 790 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 PSMA2P25787 234 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 EEF1GP26641 437 aaKnown RBP14.33□□□□□ -0.12
SMC1A-204ENST00000463684 CASP14P31944 242 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 PTSQ03393 145 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 PPP1R15BQ5SWA1 713 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 LRRC66Q68CR7 880 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 RFLNAQ6ZTI6 216 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 ZNF765Q7L2R6 523 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 COX14Q96I36 57 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 KCTD15Q96SI1 283 aaPredicted RBP14.33□□□□□ -0.12
SMC1A-204ENST00000463684 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.12
SMC1A-204ENST00000463684 SAMSN1Q9NSI8 373 aaKnown RBP14.33□□□□□ -0.12
SMC1A-204ENST00000463684 VPS18Q9P253 973 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 CPNE7Q9UBL6 633 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 LNPEPQ9UIQ6 1025 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 KCNK6Q9Y257 313 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 PCDHGA6Q9Y5G7 932 aa14.33□□□□□ -0.12
SMC1A-204ENST00000463684 MN1Q10571 1320 aaPredicted RBP14.33□□□□□ -0.12
SMC1A-204ENST00000463684 SPENQ96T58 3664 aaKnown RBP14.33□□□□□ -0.12
SMC1A-204ENST00000463684 A0A0U1RQS6 177 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 TOX3O15405 576 aaPredicted RBP14.32□□□□□ -0.12
SMC1A-204ENST00000463684 PRPSAP2O60256 369 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 DNAJC6O75061 913 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 ATP1A1P05023 1023 aaKnown RBP14.32□□□□□ -0.12
SMC1A-204ENST00000463684 ACP5P13686 325 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 ZNF30P17039 623 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 GARSP41250 739 aaKnown RBP14.32□□□□□ -0.12
SMC1A-204ENST00000463684 HCAR3P49019 387 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 KLK7P49862 253 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 SEPHS1P49903 392 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 PGDP52209 483 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 ZNF135P52742 658 aaPredicted RBP14.32□□□□□ -0.12
SMC1A-204ENST00000463684 OGDHQ02218 1023 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 SEMA5AQ13591 1074 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 TP53INP2Q8IXH6 220 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 PGBD5Q8N414 524 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 PIH1D2Q8WWB5 315 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 ELMO2Q96JJ3 720 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 AGAP2Q99490 1192 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 AGPAT1Q99943 283 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 MGME1Q9BQP7 344 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 RIOK2Q9BVS4 552 aaKnown RBP14.32□□□□□ -0.12
SMC1A-204ENST00000463684 RMI1Q9H9A7 625 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 CASS4Q9NQ75 786 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 TAB2Q9NYJ8 693 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 MAP4K5Q9Y4K4 846 aa14.32□□□□□ -0.12
SMC1A-204ENST00000463684 LILRA5A6NI73 299 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 SPAG6O75602 509 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 RASSF9O75901 435 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 DNAJB5O75953 348 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 RNF8O76064 485 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 UBXN7O94888 489 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 C9P02748 559 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 AMD1P17707 334 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 EPHB1P54762 984 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 GFERP55789 205 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 MAXP61244 160 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 SH3BP2P78314 561 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 DNASE1L3Q13609 305 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 FKBP15Q5T1M5 1219 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 MARC1Q5VT66 337 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 ZNF787Q6DD87 383 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 ACAD10Q6JQN1 1059 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 CYB5D1Q6P9G0 228 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 PHYKPLQ8IUZ5 450 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
SMC1A-204ENST00000463684 MCOLN2Q8IZK6 566 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 THAP4Q8WY91 577 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 TGM7Q96PF1 710 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 SLC25A23Q9BV35 468 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 ZWILCHQ9H900 591 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 PARVAQ9NVD7 372 aa14.31□□□□□ -0.12
SMC1A-204ENST00000463684 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
SMC1A-204ENST00000463684 A6NCN8 305 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 C21orf140B9A014 251 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 EPHB6O15197 1021 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 PEX11BO96011 259 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 PDHA1P08559 390 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 TYRP1P17643 537 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 MMP13P45452 471 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 ITKQ08881 620 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 BECN1Q14457 450 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 EIF2S3LQ2VIR3 472 aaKnown RBP14.3□□□□□ -0.12
SMC1A-204ENST00000463684 DPCR1Q3MIW9 517 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 NADK2Q4G0N4 442 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 MAMDC2Q7Z304 686 aaPredicted RBP14.3□□□□□ -0.12
SMC1A-204ENST00000463684 PPP1R3BQ86XI6 285 aa14.3□□□□□ -0.12
SMC1A-204ENST00000463684 PCMTD1Q96MG8 357 aaPredicted RBP14.3□□□□□ -0.12
SMC1A-204ENST00000463684 PEBP4Q96S96 227 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms