RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 TFDP2Q14188 446 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 PRKD1Q15139 912 aaPredicted RBP20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 TEX44Q53QW1 395 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 PDPK2PQ6A1A2 396 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 MFSD7Q6UXD7 560 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 ZNF574Q6ZN55 896 aaPredicted RBP20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 SFRP1Q8N474 314 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 PATE1Q8WXA2 126 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 RNF25Q96BH1 459 aaPredicted RBP20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 SEMA6CQ9H3T2 930 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 ZFYVE1Q9HBF4 777 aa20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 OAS3Q9Y6K5 1087 aaKnown RBP20.38■□□□□ 0.85
PDLIM4-205ENST00000463615 INPP4BO15327 924 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 CDK18Q07002 472 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 MAP9Q49MG5 647 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 ARHGAP40Q5TG30 622 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 NPNTQ6UXI9 565 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 TMC3Q7Z5M5 1100 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 RFX6Q8HWS3 928 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 TC2NQ8N9U0 490 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 TEKT5Q96M29 485 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 SRPK1Q96SB4 655 aaKnown RBP20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 CARD9Q9H257 536 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 GLOD4Q9HC38 313 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 RAD18Q9NS91 495 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 PISDQ9UG56 409 aa20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 PCYT1BQ9Y5K3 369 aaPredicted RBP20.37■□□□□ 0.85
PDLIM4-205ENST00000463615 ZFC3H1O60293 1989 aaKnown RBP20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 IGHV1OR21-1A0A087WYE8 117 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 A6NCN8 305 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 GPR89AB7ZAQ6 455 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 SPOPO43791 374 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 NUAK1O60285 661 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 GPR89BP0CG08 455 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 CD82P27701 267 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 ALDH4A1P30038 563 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 CLCNKAP51800 687 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 LIMK2P53671 638 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 GPLD1P80108 840 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 GALNT3Q14435 633 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 C16orf72Q14CZ0 275 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 ODF2Q5BJF6 829 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 MARK2Q7KZI7 788 aaKnown RBP20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 LYSMD3Q7Z3D4 306 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 OR4D9Q8NGE8 314 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 AGAP3Q96P47 875 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 CCNL2Q96S94 520 aaPredicted RBP20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 NUDT22Q9BRQ3 303 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 ZSCAN5AQ9BUG6 496 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 RDH14Q9HBH5 336 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 PDP2Q9P2J9 529 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 ADGRG1Q9Y653 693 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 ALG6Q9Y672 507 aa20.36■□□□□ 0.85
PDLIM4-205ENST00000463615 IGHV5-10-1A0A0J9YXX1 117 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 MTSS1O43312 755 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 C1QL1O75973 258 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 ASMTLO95671 621 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 ATP1A1P05023 1023 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 LIPCP11150 499 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 ITIH1P19827 911 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 PTPN3P26045 913 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 MAGEA1P43355 309 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 AMZ1Q400G9 498 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 PHF19Q5T6S3 580 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 CCDC170Q8IYT3 715 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 SLC37A2Q8TED4 501 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 TTC9Q92623 222 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 CEP41Q9BYV8 373 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 SARS2Q9NP81 518 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 AKAP7Q9P0M2 348 aaPredicted RBP20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 ZNHIT2Q9UHR6 403 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 HYOU1Q9Y4L1 999 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 KALRNO60229 2985 aa20.35■□□□□ 0.85
PDLIM4-205ENST00000463615 A0A0A6YYK5 440 aaPredicted RBP20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 NDST3O95803 873 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 ETV5P41161 510 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 C19orf57Q0VDD7 668 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 BIRC2Q13490 618 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 IYDQ6PHW0 289 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 SPOCD1Q6ZMY3 1216 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 CCDC81Q6ZN84 652 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 USP53Q70EK8 1073 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 DTX1Q86Y01 620 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 JAMLQ86YT9 394 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 KATNAL2Q8IYT4 538 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 TRAM1L1Q8N609 369 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 GPR26Q8NDV2 337 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 DTX3LQ8TDB6 740 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 TFB1MQ8WVM0 346 aaKnown RBP20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 HERPUD2Q9BSE4 406 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 TRIM39Q9HCM9 518 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 ZNF711Q9Y462 761 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 PCDHGA3Q9Y5H0 932 aa20.34■□□□□ 0.85
PDLIM4-205ENST00000463615 PRAMEF33A0A0G2JMD5 474 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 C9orf172C9J069 976 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 CHUKO15111 745 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 EFSO43281 561 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms