RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.64■□□□□ 0.73
VARS-221ENST00000463184 ANKS6Q68DC2 871 aa19.64■□□□□ 0.73
VARS-221ENST00000463184 ARHGAP22Q7Z5H3 698 aa19.64■□□□□ 0.73
VARS-221ENST00000463184 TRIM74Q86UV6 250 aa19.64■□□□□ 0.73
VARS-221ENST00000463184 ZPBPQ9BS86 351 aa19.64■□□□□ 0.73
VARS-221ENST00000463184 EFHD1Q9BUP0 239 aa19.64■□□□□ 0.73
VARS-221ENST00000463184 SPRY4Q9C004 299 aa19.64■□□□□ 0.73
VARS-221ENST00000463184 POLR1EQ9GZS1 481 aaKnown RBP19.64■□□□□ 0.73
VARS-221ENST00000463184 ISCUQ9H1K1 167 aa19.64■□□□□ 0.73
VARS-221ENST00000463184 NAV2Q8IVL1 2488 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 ASMTLO95671 621 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 EPHB1P54762 984 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 MC2RQ01718 297 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 HHEXQ03014 270 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 CEACAM20Q6UY09 585 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 ZNF761Q86XN6 746 aaPredicted RBP19.63■□□□□ 0.73
VARS-221ENST00000463184 PTRH1Q86Y79 214 aaKnown RBP19.63■□□□□ 0.73
VARS-221ENST00000463184 NLGN4XQ8N0W4 816 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 NLGN4YQ8NFZ3 816 aaPredicted RBP19.63■□□□□ 0.73
VARS-221ENST00000463184 KIAA1143Q96AT1 154 aaPredicted RBP19.63■□□□□ 0.73
VARS-221ENST00000463184 SH3KBP1Q96B97 665 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 RTP4Q96DX8 246 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 AGAP2Q99490 1192 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 STN1Q9H668 368 aaKnown RBP19.63■□□□□ 0.73
VARS-221ENST00000463184 PCDH18Q9HCL0 1135 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 SARS2Q9NP81 518 aaKnown RBP19.63■□□□□ 0.73
VARS-221ENST00000463184 FBXO8Q9NRD0 319 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 VPS18Q9P253 973 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 ZNHIT2Q9UHR6 403 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 COL12A1Q99715 3063 aa19.63■□□□□ 0.73
VARS-221ENST00000463184 DNAJC6O75061 913 aa19.62■□□□□ 0.73
VARS-221ENST00000463184 MAP3K6O95382 1288 aa19.62■□□□□ 0.73
VARS-221ENST00000463184 STC1P52823 247 aa19.62■□□□□ 0.73
VARS-221ENST00000463184 SRSF1Q07955 248 aaKnown RBP eCLIP19.62■□□□□ 0.73
VARS-221ENST00000463184 SNAP47Q5SQN1 464 aa19.62■□□□□ 0.73
VARS-221ENST00000463184 E4F1Q66K89 784 aaPredicted RBP19.62■□□□□ 0.73
VARS-221ENST00000463184 IYDQ6PHW0 289 aa19.62■□□□□ 0.73
VARS-221ENST00000463184 RIOK2Q9BVS4 552 aaKnown RBP19.62■□□□□ 0.73
VARS-221ENST00000463184 GPN2Q9H9Y4 310 aaPredicted RBP19.62■□□□□ 0.73
VARS-221ENST00000463184 RCOR3Q9P2K3 495 aaPredicted RBP19.62■□□□□ 0.73
VARS-221ENST00000463184 BZW2Q9Y6E2 419 aaKnown RBP19.62■□□□□ 0.73
VARS-221ENST00000463184 A8MU76 341 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 INPP4BO15327 924 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 NKX2-8O15522 239 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 EML2O95834 649 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 SLC2A4P14672 509 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 EPHA4P54764 986 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 TBX2Q13207 712 aaPredicted RBP19.61■□□□□ 0.73
VARS-221ENST00000463184 TXNRD3NBQ6F5E7 133 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 ALG1LQ6GMV1 187 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 CHST15Q7LFX5 561 aaPredicted RBP19.61■□□□□ 0.73
VARS-221ENST00000463184 SLC9B2Q86UD5 537 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 NIPA2Q8N8Q9 360 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 NCSTNQ92542 709 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 SMIM14Q96QK8 99 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 TRIT1Q9H3H1 467 aaKnown RBP19.61■□□□□ 0.73
VARS-221ENST00000463184 RMI1Q9H9A7 625 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 HAUS2Q9NVX0 235 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 AMACRQ9UHK6 382 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 ANAPC2Q9UJX6 822 aa19.61■□□□□ 0.73
VARS-221ENST00000463184 ZFC3H1O60293 1989 aaKnown RBP19.61■□□□□ 0.73
VARS-221ENST00000463184 CLDN7O95471 211 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 SKILP12757 684 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 CA4P22748 312 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 IL4RP24394 825 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 HNRNPH3P31942 346 aaKnown RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 GARSP41250 739 aaKnown RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 RPL26P61254 145 aaKnown RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 SLC25A11Q02978 314 aaKnown RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 ABHD18Q0P651 414 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 KRT81Q14533 505 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 SKIDA1Q1XH10 827 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 CCDC122Q5T0U0 273 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 TIGD7Q6NT04 549 aaPredicted RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 OR8K1Q8NGG5 319 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 MAML1Q92585 1016 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 CTRCQ99895 268 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 HERPUD2Q9BSE4 406 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 TDRD1Q9BXT4 1180 aaKnown RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 EPN3Q9H201 632 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 EPB41L1Q9H4G0 881 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 TBC1D29Q9UFV1 150 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 IP6K2Q9UHH9 426 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 RPL26L1Q9UNX3 145 aaKnown RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 CHKBQ9Y259 395 aa19.6■□□□□ 0.73
VARS-221ENST00000463184 TMEM184BQ9Y519 407 aaPredicted RBP19.6■□□□□ 0.73
VARS-221ENST00000463184 LOC101059948A0A1B0GTJ6 334 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 MATN3O15232 486 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 ATP1A1P05023 1023 aaKnown RBP19.59■□□□□ 0.73
VARS-221ENST00000463184 SERPING1P05155 500 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 CASRP41180 1078 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 MC1RQ01726 317 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 DSC2Q02487 901 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 GALNT2Q10471 571 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 CDC20Q12834 499 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 NFATC2Q13469 925 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 HGSNATQ68CP4 663 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 LYSMD3Q7Z3D4 306 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 CNGA4Q8IV77 575 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms