RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TMEM168Q9H0V1 697 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 GBA3Q9H227 469 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 CARD9Q9H257 536 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 LRRN3Q9H3W5 708 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 KCNK4Q9NYG8 393 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 TAAR2Q9P1P5 351 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 SAE1Q9UBE0 346 aaPredicted RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 KLF15Q9UIH9 416 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 APPL1Q9UKG1 709 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 TFR2Q9UP52 801 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 TMEM98Q9Y2Y6 226 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 COL5A1P20908 1838 aaPredicted RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 ASCC3Q8N3C0 2202 aaKnown RBP8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CCDC187A0A096LP49 1063 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 GLYATL1P3A0A0U1RQE8 302 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 GRID2IPA4D2P6 1211 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 KMOO15229 486 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 GRID2O43424 1007 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 VEGFDO43915 354 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CEACAM5P06731 702 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 PIRTP0C851 137 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 MYF5P13349 255 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 ACP5P13686 325 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 PNLIPP16233 465 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 ITGALP20701 1170 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 RBL1P28749 1068 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 PPARGP37231 505 aaPredicted RBP8.88□□□□□ -0.99
DDX39B-216ENST00000462421 HADHAP40939 763 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
DDX39B-216ENST00000462421 MAPK9P45984 424 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 GPR3P46089 330 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 UCNP55089 124 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CTBSQ01459 385 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 SEPT6Q14141 434 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 KRT33BQ14525 404 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CLPPQ16740 277 aaPredicted RBP8.88□□□□□ -0.99
DDX39B-216ENST00000462421 LONRF2Q1L5Z9 754 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 ISXQ2M1V0 245 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 LDLRAP1Q5SW96 308 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 TPRG1LQ5T0D9 272 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CERCAMQ5T4B2 595 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CYB5D1Q6P9G0 228 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 PPP1R21Q6ZMI0 780 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 B4GALNT4Q76KP1 1039 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 TECPR1Q7Z6L1 1165 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 LRRTM4Q86VH4 590 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 ZNF567Q8N184 647 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 FBXO39Q8N4B4 442 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 DNAAF3Q8N9W5 541 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 ZNF248Q8NDW4 579 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 TRIM58Q8NG06 486 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 GPBAR1Q8TDU6 330 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 HEXDCQ8WVB3 486 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 FGF11Q92914 225 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 GLYATL1Q969I3 302 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 ULK4Q96C45 1275 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CXorf40BQ96DE9 158 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 SPATA13Q96N96 652 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 TBL1YQ9BQ87 522 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 LGR4Q9BXB1 951 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CLPBQ9H078 707 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 OR2AG1Q9H205 316 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 LRRC40Q9H9A6 602 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 POLR1BQ9H9Y6 1135 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 LZTFL1Q9NQ48 299 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 DKK4Q9UBT3 224 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CRLS1Q9UJA2 301 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 WASF3Q9UPY6 502 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 ZNF148Q9UQR1 794 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 SLC17A4Q9Y2C5 497 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 PCDHB11Q9Y5F2 797 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 SLC30A1Q9Y6M5 507 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 TRPM6Q9BX84 2022 aa8.88□□□□□ -0.99
DDX39B-216ENST00000462421 CNOT1A5YKK6 2376 aaKnown RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 KIR2DS5A0A0G2JLQ3 304 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 A0A0G2JNG1 304 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 KLHL33A6NCF5 533 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 C5orf60A6NFR6 353 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 D6RAR5 112 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 KIR2DS3K7RE56 304 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 ZSCAN12O43309 604 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 MAP3K7O43318 606 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 BRINP1O60477 761 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 CDK14O94921 469 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 VIPP01282 170 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 IFNB1P01574 187 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 ATP1A1P05023 1023 aaKnown RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 MPOP05164 745 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 CELA2BP08218 269 aaPredicted RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 LPOP22079 712 aaPredicted RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 STIP1P31948 543 aaKnown RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 CSTF2P33240 577 aaKnown RBP eCLIP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 HMGCLP35914 325 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 POLD2P49005 469 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 MARCKSL1P49006 195 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 GPLD1P80108 840 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 HHEXQ03014 270 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 KIR2DS5Q14953 304 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 SLC1A5Q15758 541 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms