RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 MAGEE1Q9HCI5 957 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 EPB41L5Q9HCM4 733 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 ASCL3Q9NQ33 180 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 THSD1Q9NS62 852 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 UBP1Q9NZI7 540 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 LRIT1Q9P2V4 623 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 NFKBIL1Q9UBC1 381 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 SHOC2Q9UQ13 582 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 PLEKHM1Q9Y4G2 1056 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 PCDHGA8Q9Y5G5 932 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 ST14Q9Y5Y6 855 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 OAS3Q9Y6K5 1087 aaKnown RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 UNC13CQ8NB66 2214 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PTPRQQ9UMZ3 2332 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CCDC66A2RUB6 948 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PMS2P1A4D2B8 440 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 GRID2IPA4D2P6 1211 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PJA2O43164 708 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 DNAJC6O75061 913 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ECEL1O95672 775 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ATP1A1P05023 1023 aaKnown RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 FGF1P05230 155 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CTNNA2P26232 953 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 RBMS1P29558 406 aaKnown RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CDC25BP30305 580 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CCKBRP32239 447 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PTPN7P35236 360 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 TNNT3P45378 269 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 INHBCP55103 352 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ERVPABLB-1P60509 514 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 COPS2P61201 443 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CCDC173Q0VFZ6 552 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 EIF3IQ13347 325 aaKnown RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 BIRC2Q13490 618 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PYCR3Q53H96 274 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CCDC70Q6NSX1 233 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 IGF2-ASQ6U949 168 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 KDELC1Q6UW63 502 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ZNF438Q7Z4V0 828 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 C17orf82Q86X59 251 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PHYKPLQ8IUZ5 450 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 TMEM139Q8IV31 216 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 NAGSQ8N159 534 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ZNF567Q8N184 647 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ZNF248Q8NDW4 579 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CRELD1Q96HD1 420 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 TMEM74Q96NL1 305 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 HERPUD2Q9BSE4 406 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ZSCAN5AQ9BUG6 496 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 SPATA16Q9BXB7 569 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 GPR63Q9BZJ6 419 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 STRADBQ9C0K7 418 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 LACRTQ9GZZ8 138 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 RAD18Q9NS91 495 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 FAM153AQ9UHL3 310 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 RSPH14Q9UHP6 348 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 ATXN7L1Q9ULK2 861 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 CNOT6Q9ULM6 557 aaKnown RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PCDHA3Q9Y5H8 950 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 SPO11Q9Y5K1 396 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 PCYT1BQ9Y5K3 369 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 DUSP10Q9Y6W6 482 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 IGSF10Q6WRI0 2623 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 BPTFQ12830 3046 aa10.09□□□□□ -0.79
SF3A3-204ENST00000462258 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
SF3A3-204ENST00000462258 RHPN2P1A8MT19 583 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 H7C0C1 242 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 ACP5P13686 325 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 ITPKBP27987 946 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
SF3A3-204ENST00000462258 ATP5OP48047 213 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 WNT3AP56704 352 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 RWDD2BP57060 319 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 OTUD4Q01804 1114 aaKnown RBP10.08□□□□□ -0.8
SF3A3-204ENST00000462258 XRCC4Q13426 336 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 NR1D2Q14995 579 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 PDPK2PQ6A1A2 396 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 CHST15Q7LFX5 561 aaPredicted RBP10.08□□□□□ -0.8
SF3A3-204ENST00000462258 TMC3Q7Z5M5 1100 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 CDKL3Q8IVW4 592 aaPredicted RBP10.08□□□□□ -0.8
SF3A3-204ENST00000462258 TXLNBQ8N3L3 684 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 ARL14Q8N4G2 192 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 TRAM1L1Q8N609 369 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 LRRC57Q8N9N7 239 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 SPC24Q8NBT2 197 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 GPR26Q8NDV2 337 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 IPMKQ8NFU5 416 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 ACTL9Q8TC94 416 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 KCNE4Q8WWG9 221 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 PRR11Q96HE9 360 aaPredicted RBP10.08□□□□□ -0.8
SF3A3-204ENST00000462258 OXNAD1Q96HP4 312 aaPredicted RBP10.08□□□□□ -0.8
SF3A3-204ENST00000462258 MRGPRX2Q96LB1 330 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 FCRL5Q96RD9 977 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 SRPK1Q96SB4 655 aaKnown RBP10.08□□□□□ -0.8
SF3A3-204ENST00000462258 DESI2Q9BSY9 194 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 OSBPL8Q9BZF1 889 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 ZMYND15Q9H091 742 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 GBA3Q9H227 469 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 RMI1Q9H9A7 625 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 IMPACTQ9P2X3 320 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms