RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TMEM159Q96B96 161 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 SEMA6CQ9H3T2 930 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 ZFYVE1Q9HBF4 777 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 RDH14Q9HBH5 336 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 GLOD4Q9HC38 313 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 CPNE5Q9HCH3 593 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 SAE1Q9UBE0 346 aaPredicted RBP18.8■□□□□ 0.6
VARS-220ENST00000461874 ZNHIT2Q9UHR6 403 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 PCYT1BQ9Y5K3 369 aaPredicted RBP18.8■□□□□ 0.6
VARS-220ENST00000461874 EIF4E1BA6NMX2 242 aaKnown RBP18.79■□□□□ 0.6
VARS-220ENST00000461874 ATXN7O15265 892 aaPredicted RBP18.79■□□□□ 0.6
VARS-220ENST00000461874 PPM1DO15297 605 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 CST8O60676 142 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 JMJD7P0C870 316 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 PTPN3P26045 913 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 CD1CP29017 333 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 CDK18Q07002 472 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 BIRC2Q13490 618 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 MAP9Q49MG5 647 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 USP53Q70EK8 1073 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 CCDC170Q8IYT3 715 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 SPATA22Q8NHS9 363 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 TEKT5Q96M29 485 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 GOLPH3Q9H4A6 298 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 MAGEE1Q9HCI5 957 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 PISDQ9UG56 409 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 SHOC2Q9UQ13 582 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 PCDHA13Q9Y5I0 950 aa18.79■□□□□ 0.6
VARS-220ENST00000461874 A0A0A6YYK5 440 aaPredicted RBP18.78■□□□□ 0.6
VARS-220ENST00000461874 MT-CYBP00156 380 aaPredicted RBP18.78■□□□□ 0.6
VARS-220ENST00000461874 PIRTP0C851 137 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 PECAM1P16284 738 aaPredicted RBP18.78■□□□□ 0.6
VARS-220ENST00000461874 ADCY2Q08462 1091 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 CLN3Q13286 438 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 LLGL1Q15334 1064 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 PCSK7Q16549 785 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 PHF19Q5T6S3 580 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 ARHGAP40Q5TG30 622 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 ZNF574Q6ZN55 896 aaPredicted RBP18.78■□□□□ 0.6
VARS-220ENST00000461874 TMC3Q7Z5M5 1100 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 JAMLQ86YT9 394 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 KATNAL2Q8IYT4 538 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 LSM14AQ8ND56 463 aaKnown RBP18.78■□□□□ 0.6
VARS-220ENST00000461874 SNRNP27Q8WVK2 155 aaKnown RBP18.78■□□□□ 0.6
VARS-220ENST00000461874 TFB1MQ8WVM0 346 aaKnown RBP18.78■□□□□ 0.6
VARS-220ENST00000461874 CMKLR1Q99788 373 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 NUDT22Q9BRQ3 303 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 RMI1Q9H9A7 625 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 ACSL6Q9UKU0 697 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 PRKAB1Q9Y478 270 aa18.78■□□□□ 0.6
VARS-220ENST00000461874 BAHCC1Q9P281 2608 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 TK2O00142 265 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 AGRPO00253 132 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 NVLO15381 856 aaKnown RBP18.77■□□□□ 0.6
VARS-220ENST00000461874 NDST3O95803 873 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 ITIH1P19827 911 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 DCDC1P59894 354 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 WASHC5Q12768 1159 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 SQSTM1Q13501 440 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 SPA17Q15506 151 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 TFDP3Q5H9I0 405 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 KAZNQ674X7 775 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 RCOR2Q8IZ40 523 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 SFRP1Q8N474 314 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 GPR26Q8NDV2 337 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 SLC39A7Q92504 469 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 SPATA16Q9BXB7 569 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 RAD18Q9NS91 495 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 NFKBIL1Q9UBC1 381 aaPredicted RBP18.77■□□□□ 0.6
VARS-220ENST00000461874 TFR2Q9UP52 801 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 ZNF711Q9Y462 761 aa18.77■□□□□ 0.6
VARS-220ENST00000461874 TRBV23OR9-2A0A075B6M9 112 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 hCG_1818297A0A087WSY0 165 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 IGHV1OR21-1A0A087WYE8 117 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 PMPCBO75439 489 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 ZRANB2O95218 330 aaKnown RBP eCLIP18.76■□□□□ 0.59
VARS-220ENST00000461874 EML2O95834 649 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 CD68P34810 354 aaPredicted RBP18.76■□□□□ 0.59
VARS-220ENST00000461874 FASLGP48023 281 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 VAC14Q08AM6 782 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 C16orf72Q14CZ0 275 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 NKAIN2Q5VXU1 208 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 ALS2CLQ60I27 953 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 CCDC70Q6NSX1 233 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 C11orf63Q6NUN7 778 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 CHST15Q7LFX5 561 aaPredicted RBP18.76■□□□□ 0.59
VARS-220ENST00000461874 SLC37A2Q8TED4 501 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 P3H4Q92791 437 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 SRPK1Q96SB4 655 aaKnown RBP18.76■□□□□ 0.59
VARS-220ENST00000461874 ZSCAN5AQ9BUG6 496 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 GPR63Q9BZJ6 419 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 CARD9Q9H257 536 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 KCNK4Q9NYG8 393 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 UBP1Q9NZI7 540 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.76■□□□□ 0.59
VARS-220ENST00000461874 ATXN10Q9UBB4 475 aa18.76■□□□□ 0.59
VARS-220ENST00000461874 IGHV5-10-1A0A0J9YXX1 117 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 HGSO14964 777 aaPredicted RBP18.75■□□□□ 0.59
VARS-220ENST00000461874 MTSS1O43312 755 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 NUAK1O60285 661 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms