RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZNF367Q7RTV3 350 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 KBTBD6Q86V97 674 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 MIGA1Q8NAN2 632 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 ZBTB8BQ8NAP8 495 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 POGLUT1Q8NBL1 392 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 HJURPQ8NCD3 748 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 CSNK2A3Q8NEV1 391 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 ZNF622Q969S3 477 aaKnown RBP eCLIP3.82□□□□□ -1.8
CLK1-206ENST00000461326 CNDP2Q96KP4 475 aaKnown RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 PPP1R13BQ96KQ4 1090 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 SRSF8Q9BRL6 282 aaKnown RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 HAUS8Q9BT25 410 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 RBM38Q9H0Z9 239 aaKnown RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 DENND2DQ9H6A0 471 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 ACSS1Q9NUB1 689 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 STK39Q9UEW8 545 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 OR14J1Q9UGF5 321 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 CDC14AQ9UNH5 594 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 ZNF711Q9Y462 761 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 CLIC4Q9Y696 253 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 ATXN2Q99700 1313 aaKnown RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 A0A1W2PR77 199 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 TCRBV21S2A2A0A5A6 115 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 A6NL46 340 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 TIMM23O14925 209 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 LCATP04180 440 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 APOA4P06727 396 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 ABCB1P08183 1280 aaPredicted RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 CYC1P08574 325 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 FGF2P09038 288 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 VPREB1P12018 145 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 STX2P32856 288 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 LINC00205P59089 165 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 FOXM1Q08050 763 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 DSC1Q08554 894 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 AIMP1Q12904 312 aaKnown RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 TRAF2Q12933 501 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 CDC16Q13042 620 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 CTTNQ14247 550 aaKnown RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 MYBPC2Q14324 1141 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 KYNUQ16719 465 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 CCDC96Q2M329 555 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 DCST1Q5T197 706 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 LRIF1Q5T3J3 769 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 ERMARDQ5T6L9 678 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 C8orf82Q6P1X6 216 aaPredicted RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 COLCA1Q6ZS62 124 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 LINC00346Q8IVM7 164 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 SCYL3Q8IZE3 742 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 OR1J2Q8NGS2 313 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 OR8K5Q8NH50 307 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 GSDMBQ8TAX9 411 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 DUSP19Q8WTR2 217 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 DNAAF4Q8WXU2 420 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 ZNF653Q96CK0 615 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 RTN4RQ9BZR6 473 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 FOXP1Q9H334 677 aaPredicted RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 CNGB3Q9NQW8 809 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 HIF1ANQ9NWT6 349 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 MTMR10Q9NXD2 777 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 PADI1Q9ULC6 663 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 PTRH2Q9Y3E5 179 aaKnown RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 MAGED1Q9Y5V3 778 aaPredicted RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.81□□□□□ -1.8
CLK1-206ENST00000461326 CKAP5Q14008 2032 aa3.81□□□□□ -1.8
CLK1-206ENST00000461326 ABCC9O60706 1549 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 hCG_1809904A0A1W2PP81 198 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 A0A1W2PPE2 198 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 A0A1W2PR64 198 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 C1orf226A1L170 272 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 FAM90A10PA6NDY2 464 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 OR6C75A6NL08 312 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 ERVV-2B6SEH9 535 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 I6L893 689 aaPredicted RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 M0QZ24 198 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 UBE2CO00762 179 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 SPINT2O43291 252 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 HSPA12AO43301 675 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 GH2P01242 217 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 TUBBP07437 444 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 MMP9P14780 707 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 TRIM21P19474 475 aaKnown RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 PIGAP37287 484 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 MSH2P43246 934 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 CAPZA2P47755 286 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 AMTP48728 403 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 PGGT1BP53609 377 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 UBXN2AP68543 259 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 PPATQ06203 517 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 GRAPQ13588 217 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 CTF1Q16619 201 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 MYLK3Q32MK0 819 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 FNBP1LQ5T0N5 605 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 DHRS7BQ6IAN0 325 aaPredicted RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 KRT80Q6KB66 452 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 RPUSD3Q6P087 351 aaKnown RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 FAM122CQ6P4D5 195 aa3.8□□□□□ -1.8
CLK1-206ENST00000461326 CTU1Q7Z7A3 348 aaKnown RBP3.8□□□□□ -1.8
CLK1-206ENST00000461326 KCTD6Q8NC69 237 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms