RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 NDST3O95803 873 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 EPOP01588 193 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 CEACAM5P06731 702 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 RBMS1P29558 406 aaKnown RBP18.3■□□□□ 0.52
COL9A2-205ENST00000461118 GPR1P46091 355 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 CDK3Q00526 305 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 OTUD4Q01804 1114 aaKnown RBP18.3■□□□□ 0.52
COL9A2-205ENST00000461118 GALNT3Q14435 633 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 CCDC181Q5TID7 509 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 RBM44Q6ZP01 1051 aaKnown RBP18.3■□□□□ 0.52
COL9A2-205ENST00000461118 PID1Q7Z2X4 250 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 GKN2Q86XP6 184 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 SLC35F3Q8IY50 421 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 CCHCR1Q8TD31 782 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 SCG3Q8WXD2 468 aaKnown RBP18.3■□□□□ 0.52
COL9A2-205ENST00000461118 HES6Q96HZ4 224 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 SRPK1Q96SB4 655 aaKnown RBP18.3■□□□□ 0.52
COL9A2-205ENST00000461118 FRMD8Q9BZ67 464 aaPredicted RBP18.3■□□□□ 0.52
COL9A2-205ENST00000461118 TSGA10Q9BZW7 698 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 KLHL8Q9P2G9 620 aaPredicted RBP18.3■□□□□ 0.52
COL9A2-205ENST00000461118 FAM153AQ9UHL3 310 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 CD84Q9UIB8 345 aa18.3■□□□□ 0.52
COL9A2-205ENST00000461118 LOC285095A0A1B0GVY8 99 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 PRSS38A1L453 326 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 H7C0C1 242 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 KRT86O43790 486 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 CELA2BP08218 269 aaPredicted RBP18.29■□□□□ 0.52
COL9A2-205ENST00000461118 NFKB1P19838 968 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 RBL1P28749 1068 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 ATP5OP48047 213 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 SPINT3P49223 89 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 RPIAP49247 311 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 AADACL2Q6P093 401 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 KDELC1Q6UW63 502 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 KDELC2Q7Z4H8 507 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 LRRC8AQ8IWT6 810 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 SCARF2Q96GP6 870 aaPredicted RBP18.29■□□□□ 0.52
COL9A2-205ENST00000461118 WDR24Q96S15 920 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 RIOK2Q9BVS4 552 aaKnown RBP18.29■□□□□ 0.52
COL9A2-205ENST00000461118 CLMPQ9H6B4 373 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 ZFYVE1Q9HBF4 777 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 CYP4F12Q9HCS2 524 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 MRPL40Q9NQ50 206 aaKnown RBP18.29■□□□□ 0.52
COL9A2-205ENST00000461118 PKD2L2Q9NZM6 624 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 SLC17A4Q9Y2C5 497 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 CAPN6Q9Y6Q1 641 aa18.29■□□□□ 0.52
COL9A2-205ENST00000461118 AHCTF1Q8WYP5 2266 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 NTN3O00634 580 aaPredicted RBP18.28■□□□□ 0.52
COL9A2-205ENST00000461118 PMPCBO75439 489 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 ZNF189O75820 626 aaPredicted RBP18.28■□□□□ 0.52
COL9A2-205ENST00000461118 FTCDO95954 541 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 FUCA1P04066 466 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 RBP3P10745 1247 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 EIF3EP60228 445 aaKnown RBP18.28■□□□□ 0.52
COL9A2-205ENST00000461118 NR0B2Q15466 257 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 PCSK7Q16549 785 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 HENMT1Q5T8I9 393 aaKnown RBP18.28■□□□□ 0.52
COL9A2-205ENST00000461118 CCDC70Q6NSX1 233 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 ZNF662Q6ZS27 426 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 LYSMD3Q7Z3D4 306 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 TMC3Q7Z5M5 1100 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 EID2BQ96D98 161 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 AGAP2Q99490 1192 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 FERMT1Q9BQL6 677 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 TMEM168Q9H0V1 697 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 CDH19Q9H159 772 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 FAM83DQ9H4H8 585 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 TRNAU1APQ9NX07 287 aaKnown RBP18.28■□□□□ 0.52
COL9A2-205ENST00000461118 UBP1Q9NZI7 540 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 PACSIN2Q9UNF0 486 aaPredicted RBP18.28■□□□□ 0.52
COL9A2-205ENST00000461118 DOLKQ9UPQ8 538 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 UNC13CQ8NB66 2214 aa18.28■□□□□ 0.52
COL9A2-205ENST00000461118 GOLGA6CA6NDK9 693 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 GOLGA6BA6NDN3 693 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 IVLP07476 585 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 GOLGA6DP0CG33 693 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 MLLT3P42568 568 aaPredicted RBP18.27■□□□□ 0.52
COL9A2-205ENST00000461118 WNT3AP56704 352 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 KLF1Q13351 362 aaPredicted RBP18.27■□□□□ 0.52
COL9A2-205ENST00000461118 MPP3Q13368 585 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 OGFOD3Q6PK18 319 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 CCDC81Q6ZN84 652 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 CDKL3Q8IVW4 592 aaPredicted RBP18.27■□□□□ 0.52
COL9A2-205ENST00000461118 ARL10Q8N8L6 244 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 EXD3Q8N9H8 876 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 TTC13Q8NBP0 860 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 WDR36Q8NI36 951 aaKnown RBP18.27■□□□□ 0.52
COL9A2-205ENST00000461118 GPBAR1Q8TDU6 330 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 CCDC97Q96F63 343 aaPredicted RBP18.27■□□□□ 0.52
COL9A2-205ENST00000461118 OXNAD1Q96HP4 312 aaPredicted RBP18.27■□□□□ 0.52
COL9A2-205ENST00000461118 COX14Q96I36 57 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 MRGPRX2Q96LB1 330 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 C10orf88Q9H8K7 445 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 GOLGA6AQ9NYA3 693 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 NFKBIL1Q9UBC1 381 aaPredicted RBP18.27■□□□□ 0.52
COL9A2-205ENST00000461118 GUCA1BQ9UMX6 200 aa18.27■□□□□ 0.52
COL9A2-205ENST00000461118 PTPN13Q12923 2485 aa18.27■□□□□ 0.51
COL9A2-205ENST00000461118 SPTA1P02549 2419 aa18.27■□□□□ 0.51
COL9A2-205ENST00000461118 ARHGEF17Q96PE2 2063 aaPredicted RBP18.26■□□□□ 0.51
COL9A2-205ENST00000461118 GOLGA6L9A6NEM1 432 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms