RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	ZNF778	Q96MU6	729 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	RANBP9	Q96S59	729 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	ZSCAN5A	Q9BUG6	496 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A7	Q9HAW7	530 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A10	Q9HAW8	530 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A8	Q9HAW9	530 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	TM7SF3	Q9NS93	570 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	NLE1	Q9NVX2	485 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	SYBU	Q9NX95	663 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	KL	Q9UEF7	1012 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	SLC2A6	Q9UGQ3	507 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	TCAF1	Q9Y4C2	921 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	SPTBN2	O15020	2390 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	HEATR9	A2RTY3	570 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	FAM187A	A6NFU0	413 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	EFCAB8	A8MWE9	144 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PPFIA2	O75334	1257 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PIAS2	O75928	621 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PYGL	P06737	847 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	ZNF883	P0CG24	379 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	CD59	P13987	128 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	JUND	P17535	347 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	ADRA1D	P25100	572 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PSMA3	P25788	255 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	HTR1B	P28222	390 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	RPL21	P46778	160 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	NPY2R	P49146	381 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	ARRB1	P49407	418 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	LIMK1	P53667	647 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	SRP54	P61011	504 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	ARHGAP8	P85298	464 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PDE1B	Q01064	536 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	KHDC1	Q4VXA5	237 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	TSTD2	Q5T7W7	516 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	KANSL1	Q7Z3B3	1105 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	RD3	Q7Z3Z2	195 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	HID1	Q8IV36	788 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PHACTR4	Q8IZ21	702 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	AGGF1	Q8N302	714 aa	eCLIP	13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	MPP5	Q8N3R9	675 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	OXR1	Q8N573	874 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	OR56A4	Q8NGH8	313 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	OR13J1	Q8NGT2	312 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	DTX3L	Q8TDB6	740 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	NETO1	Q8TDF5	533 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	SAP25	Q8TEE9	199 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	STYX	Q8WUJ0	223 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	GLYATL1	Q969I3	302 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	TBATA	Q96M53	351 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	SERPINB12	Q96P63	405 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	CHRAC1	Q9NRG0	131 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	UCKL1	Q9NWZ5	548 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	BFAR	Q9NZS9	450 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	SNX24	Q9Y343	169 aa		13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-229	ENST00000460826	PRSS38	A1L453	326 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	TP73	O15350	636 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	DFNA5	O60443	496 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	MTX2	O75431	263 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	SEC31A	O94979	1220 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	PRAMEF1	O95521	474 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	CELA2B	P08218	269 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	PRSS56	P0CW18	603 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	MLN	P12872	115 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	KEL	P23276	732 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	DGKA	P23743	735 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	DEK	P35659	375 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	MAGEA3	P43357	314 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	HK3	P52790	923 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	ITGA8	P53708	1063 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	SARNP	P82979	210 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	PPARD	Q03181	441 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	TUBB2A	Q13885	445 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	TCEA2	Q15560	299 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	PCID2	Q5JVF3	399 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	ZDHHC20	Q5W0Z9	365 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	PDPK2P	Q6A1A2	396 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	PPHLN1	Q8NEY8	458 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	BTN2A2	Q8WVV5	523 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	CCDC97	Q96F63	343 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	CDKN2AIPNL	Q96HQ2	116 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	PWWP2A	Q96N64	755 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	VPS35	Q96QK1	796 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	TRIM56	Q9BRZ2	755 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	LRRC61	Q9BV99	259 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	TUBB2B	Q9BVA1	445 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	IL22	Q9GZX6	179 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	DPH5	Q9H2P9	285 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	FAM96A	Q9H5X1	160 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	CYP4F12	Q9HCS2	524 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	APOBEC3B	Q9UH17	382 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	MOSPD1	Q9UJG1	213 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	SLC17A4	Q9Y2C5	497 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	BTBD3	Q9Y2F9	522 aa		13.88	□□□□□ -0.19
HDLBP-229	ENST00000460826	OR51F1	A6NGY5	319 aa		13.87	□□□□□ -0.19
HDLBP-229	ENST00000460826		H7C0S8	307 aa		13.87	□□□□□ -0.19
HDLBP-229	ENST00000460826	TNFRSF10C	O14798	259 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms