RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 MAN2B2Q9Y2E5 1009 aa13.09□□□□□ -0.31
SRRT-206ENST00000460194 PRKAB1Q9Y478 270 aa13.09□□□□□ -0.31
SRRT-206ENST00000460194 MN1Q10571 1320 aaPredicted RBP13.09□□□□□ -0.31
SRRT-206ENST00000460194 MED13Q9UHV7 2174 aa13.08□□□□□ -0.31
SRRT-206ENST00000460194 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 PRR19A6NJB7 356 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 FADS2P1A8MWK0 482 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 H3BRJ5 948 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 STK17BO94768 372 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 C9P02748 559 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
SRRT-206ENST00000460194 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 GOLGA6DP0CG33 693 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 GP1BBP13224 206 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 NFKBIAP25963 317 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 STAT5AP42229 794 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 ARSEP51690 589 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 SLC25A11Q02978 314 aaKnown RBP13.08□□□□□ -0.32
SRRT-206ENST00000460194 MAP7Q14244 749 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 HENMT1Q5T8I9 393 aaKnown RBP13.08□□□□□ -0.32
SRRT-206ENST00000460194 CEACAM20Q6UY09 585 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 APOBEC4Q8WW27 367 aaKnown RBP13.08□□□□□ -0.32
SRRT-206ENST00000460194 STARD8Q92502 1023 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 EID2BQ96D98 161 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 TDRD1Q9BXT4 1180 aaKnown RBP13.08□□□□□ -0.32
SRRT-206ENST00000460194 NT5MQ9NPB1 228 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 GOLGA6AQ9NYA3 693 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
SRRT-206ENST00000460194 TNRC6AQ8NDV7 1962 aaKnown RBP13.08□□□□□ -0.32
SRRT-206ENST00000460194 SHANK1Q9Y566 2161 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 UNC79Q9P2D8 2635 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 INPP4BO15327 924 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 CLDN7O95471 211 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 PYGLP06737 847 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 FURINP09958 794 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 F3P13726 295 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 ZNF28P17035 718 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 ARL4AP40617 200 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 CLCNKAP51800 687 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 UBE2IP63279 158 aaKnown RBP13.07□□□□□ -0.32
SRRT-206ENST00000460194 BIRC2Q13490 618 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 CHST15Q7LFX5 561 aaPredicted RBP13.07□□□□□ -0.32
SRRT-206ENST00000460194 LRRC49Q8IUZ0 686 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 BBS5Q8N3I7 341 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 ATPAF2Q8N5M1 289 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 NCSTNQ92542 709 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 FATE1Q969F0 183 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 AHCYL2Q96HN2 611 aaKnown RBP13.07□□□□□ -0.32
SRRT-206ENST00000460194 EFHD1Q9BUP0 239 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 TRIT1Q9H3H1 467 aaKnown RBP13.07□□□□□ -0.32
SRRT-206ENST00000460194 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
SRRT-206ENST00000460194 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.07□□□□□ -0.32
SRRT-206ENST00000460194 PLAAQ9Y263 795 aa13.07□□□□□ -0.32
SRRT-206ENST00000460194 MRPS18BQ9Y676 258 aaKnown RBP13.07□□□□□ -0.32
SRRT-206ENST00000460194 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 LILRA5A6NI73 299 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 NUAK1O60285 661 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 MMP2P08253 660 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 CD48P09326 243 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 GARSP41250 739 aaKnown RBP13.06□□□□□ -0.32
SRRT-206ENST00000460194 SPINT3P49223 89 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 DSC2Q02487 901 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 GALNT2Q10471 571 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 MMRN1Q13201 1228 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 NFATC2Q13469 925 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 DEFB109BQ30KR1 87 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 SNAP47Q5SQN1 464 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 LYSMD3Q7Z3D4 306 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 SLC9B2Q86UD5 537 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 HSPH1Q92598 858 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 KIAA1143Q96AT1 154 aaPredicted RBP13.06□□□□□ -0.32
SRRT-206ENST00000460194 ZNF653Q96CK0 615 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 PLEKHG4BQ96PX9 1271 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 HERPUD2Q9BSE4 406 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 TBC1D10AQ9BXI6 508 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 POLR1EQ9GZS1 481 aaKnown RBP13.06□□□□□ -0.32
SRRT-206ENST00000460194 RMI1Q9H9A7 625 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 UCK1Q9HA47 277 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 SCHIP1Q9P0W5 487 aaPredicted RBP13.06□□□□□ -0.32
SRRT-206ENST00000460194 ZNHIT2Q9UHR6 403 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 KCNK6Q9Y257 313 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 CHKBQ9Y259 395 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 SCINQ9Y6U3 715 aa13.06□□□□□ -0.32
SRRT-206ENST00000460194 KIR2DS5A0A0G2JLQ3 304 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 A0A0G2JNG1 304 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 KIR2DS3K7RE56 304 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 POLR1CO15160 346 aaPredicted RBP13.05□□□□□ -0.32
SRRT-206ENST00000460194 MATN3O15232 486 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 MFSD11O43934 449 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 NTRK1P04629 796 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 NR1D1P20393 614 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 GFERP55789 205 aa13.05□□□□□ -0.32
SRRT-206ENST00000460194 KIR2DS5Q14953 304 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms