RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 EXD1Q8NHP7 514 aa18.38■□□□□ 0.53
HDAC11-216ENST00000458642 SLC45A3Q96JT2 553 aa18.38■□□□□ 0.53
HDAC11-216ENST00000458642 DPYSL5Q9BPU6 564 aa18.38■□□□□ 0.53
HDAC11-216ENST00000458642 TBC1D10AQ9BXI6 508 aa18.38■□□□□ 0.53
HDAC11-216ENST00000458642 TDRD1Q9BXT4 1180 aaKnown RBP18.38■□□□□ 0.53
HDAC11-216ENST00000458642 POLR1EQ9GZS1 481 aaKnown RBP18.38■□□□□ 0.53
HDAC11-216ENST00000458642 THAP2Q9H0W7 228 aa18.38■□□□□ 0.53
HDAC11-216ENST00000458642 GPN2Q9H9Y4 310 aaPredicted RBP18.38■□□□□ 0.53
HDAC11-216ENST00000458642 MRPL47Q9HD33 250 aaKnown RBP18.38■□□□□ 0.53
HDAC11-216ENST00000458642 ARFGAP3Q9NP61 516 aa18.38■□□□□ 0.53
HDAC11-216ENST00000458642 ZNF891A8MT65 544 aaPredicted RBP18.37■□□□□ 0.53
HDAC11-216ENST00000458642 SNX2O60749 519 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 MYBL1P10243 752 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 ZNF30P17039 623 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 SERPINB6P35237 376 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 GARSP41250 739 aaKnown RBP18.37■□□□□ 0.53
HDAC11-216ENST00000458642 EPHB1P54762 984 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 RAB15P59190 212 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 TYRO3Q06418 890 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 PEX6Q13608 980 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 LRP8Q14114 963 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 ANO6Q4KMQ2 910 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 ZNF648Q5T619 568 aaPredicted RBP18.37■□□□□ 0.53
HDAC11-216ENST00000458642 NCBP2-AS2Q69YL0 99 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 NLGN4XQ8N0W4 816 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 LPCAT1Q8NF37 534 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 NLGN4YQ8NFZ3 816 aaPredicted RBP18.37■□□□□ 0.53
HDAC11-216ENST00000458642 ARRDC2Q8TBH0 407 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 TEKT4Q8WW24 435 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 MAML1Q92585 1016 aa18.37■□□□□ 0.53
HDAC11-216ENST00000458642 MRPS18BQ9Y676 258 aaKnown RBP18.37■□□□□ 0.53
HDAC11-216ENST00000458642 STK17BO94768 372 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 HLA-DQB2P05538 268 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 GJC1P36383 396 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 ARSEP51690 589 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 GALNT2Q10471 571 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 CDC20Q12834 499 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 KRT81Q14533 505 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 HGSNATQ68CP4 663 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 ALG1LQ6GMV1 187 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 IYDQ6PHW0 289 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 WDR74Q6RFH5 385 aaPredicted RBP18.36■□□□□ 0.53
HDAC11-216ENST00000458642 NLRP8Q86W28 1048 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 TRIM11Q96F44 468 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 SARS2Q9NP81 518 aaKnown RBP18.36■□□□□ 0.53
HDAC11-216ENST00000458642 RBM22Q9NW64 420 aaKnown RBP eCLIP18.36■□□□□ 0.53
HDAC11-216ENST00000458642 DTLQ9NZJ0 730 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 ANAPC7Q9UJX3 599 aa18.36■□□□□ 0.53
HDAC11-216ENST00000458642 F8A1P23610 371 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 GFERP55789 205 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 DPYSL3Q14195 570 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 PIGHQ14442 188 aaPredicted RBP18.35■□□□□ 0.53
HDAC11-216ENST00000458642 DEFB109BQ30KR1 87 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 HENMT1Q5T8I9 393 aaKnown RBP18.35■□□□□ 0.53
HDAC11-216ENST00000458642 NIPA2Q8N8Q9 360 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 FAM71BQ8TC56 605 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 EID2BQ96D98 161 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 TEFMQ96QE5 360 aaKnown RBP18.35■□□□□ 0.53
HDAC11-216ENST00000458642 NUP85Q9BW27 656 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 PRDM8Q9NQV8 689 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 SCHIP1Q9P0W5 487 aaPredicted RBP18.35■□□□□ 0.53
HDAC11-216ENST00000458642 VPS18Q9P253 973 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 NBPF19A0A087WUL8 3843 aa18.35■□□□□ 0.53
HDAC11-216ENST00000458642 NBASA2RRP1 2371 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 C1orf232A0A0U1RR37 186 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 MATN3O15232 486 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 DLGAP3O95886 979 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 ZNF28P17035 718 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 NR1D1P20393 614 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 MAP4P27816 1152 aaKnown RBP18.34■□□□□ 0.53
HDAC11-216ENST00000458642 SSR1P43307 286 aaKnown RBP18.34■□□□□ 0.53
HDAC11-216ENST00000458642 SPINT3P49223 89 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 ZNF165P49910 485 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 FOXK1P85037 733 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 GBE1Q04446 702 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 PAFAH1B3Q15102 231 aaKnown RBP18.34■□□□□ 0.53
HDAC11-216ENST00000458642 C16orf46Q6P387 395 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 CEACAM20Q6UY09 585 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 NDUFAF2Q8N183 169 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 C9orf43Q8TAL5 461 aaPredicted RBP18.34■□□□□ 0.53
HDAC11-216ENST00000458642 STARD8Q92502 1023 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 ABHD17AQ96GS6 310 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 BRD8Q9H0E9 1235 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 PCDH9Q9HC56 1237 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 FBXO8Q9NRD0 319 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 SIDT1Q9NXL6 827 aaKnown RBP18.34■□□□□ 0.53
HDAC11-216ENST00000458642 OGFRQ9NZT2 677 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 ATXN10Q9UBB4 475 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 TUBD1Q9UJT1 453 aa18.34■□□□□ 0.53
HDAC11-216ENST00000458642 TMEM184BQ9Y519 407 aaPredicted RBP18.34■□□□□ 0.53
HDAC11-216ENST00000458642 A0A1B0GTH6 734 aa18.33■□□□□ 0.52
HDAC11-216ENST00000458642 K7EM74 188 aa18.33■□□□□ 0.52
HDAC11-216ENST00000458642 PYGLP06737 847 aa18.33■□□□□ 0.52
HDAC11-216ENST00000458642 MMP2P08253 660 aa18.33■□□□□ 0.52
HDAC11-216ENST00000458642 F3P13726 295 aa18.33■□□□□ 0.52
HDAC11-216ENST00000458642 ZNF8P17098 575 aaPredicted RBP18.33■□□□□ 0.52
HDAC11-216ENST00000458642 CASRP41180 1078 aa18.33■□□□□ 0.52
HDAC11-216ENST00000458642 SLC10A2Q12908 348 aaPredicted RBP18.33■□□□□ 0.52
HDAC11-216ENST00000458642 QPCTQ16769 361 aa18.33■□□□□ 0.52
HDAC11-216ENST00000458642 TDRD12Q587J7 1177 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms