RNA–Protein interactions for RNA: ENST00000458271.6

CSRP1-203, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 1,324 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-203ENST00000458271 GPR26Q8NDV2 337 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 SCARF2Q96GP6 870 aaPredicted RBP12.36□□□□□ -0.43
CSRP1-203ENST00000458271 OR2M4Q96R27 311 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 SPATA16Q9BXB7 569 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 SYNDIG1Q9H7V2 258 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 SPATS2LQ9NUQ6 558 aaKnown RBP12.36□□□□□ -0.43
CSRP1-203ENST00000458271 TAAR2Q9P1P5 351 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 PLEKHM1Q9Y4G2 1056 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 GPSM3Q9Y4H4 160 aa12.36□□□□□ -0.43
CSRP1-203ENST00000458271 ZFC3H1O60293 1989 aaKnown RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 APC2O95996 2303 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 KRT37O76014 449 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 ASMTLO95671 621 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 EPOP01588 193 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 HLA-DPA1P20036 260 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 PSMB4P28070 264 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 C14orf28Q4W4Y0 310 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 PYCR3Q53H96 274 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 ZNF569Q5MCW4 686 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 OGFOD3Q6PK18 319 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 RBM44Q6ZP01 1051 aaKnown RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 OR6C4Q8NGE1 309 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 CCDC110Q8TBZ0 833 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 SPATA13Q96N96 652 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 SRPK1Q96SB4 655 aaKnown RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 BPIFA1Q9NP55 256 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 RAD18Q9NS91 495 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 VPS18Q9P253 973 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 NFKBIL1Q9UBC1 381 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 DKK4Q9UBT3 224 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 R3HDM2Q9Y2K5 976 aaKnown RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 RAXQ9Y2V3 346 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 PRKAB1Q9Y478 270 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 PCYT1BQ9Y5K3 369 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 AK5Q9Y6K8 562 aa12.35□□□□□ -0.43
CSRP1-203ENST00000458271 ARHGEF17Q96PE2 2063 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-203ENST00000458271 TCRBV7S2A1N4TA0A589 114 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 DNAJC6O75061 913 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 TCEA3O75764 348 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 ANXA9O76027 345 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 AGTP01019 485 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 FGF1P05230 155 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 RPLP0P05388 317 aaKnown RBP12.34□□□□□ -0.43
CSRP1-203ENST00000458271 CCDC175P0C221 793 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 GLB1P16278 677 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 BPIP17213 487 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 HMGCLP35914 325 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 ACTR1BP42025 376 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 PDX1P52945 283 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 GEMP55040 296 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
CSRP1-203ENST00000458271 ACTR1AP61163 376 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 LRP8Q14114 963 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 SPIDRQ14159 915 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 HLTFQ14527 1009 aaKnown RBP eCLIP12.34□□□□□ -0.43
CSRP1-203ENST00000458271 ISXQ2M1V0 245 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 GLT6D1Q7Z4J2 308 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 LRRC8AQ8IWT6 810 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 TTC30BQ8N4P2 665 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 TRAM1L1Q8N609 369 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 BLOC1S5Q8TDH9 187 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 ZDHHC1Q8WTX9 485 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 PATE1Q8WXA2 126 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 TRABDQ9H4I3 376 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 ZNHIT2Q9UHR6 403 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 RNF215Q9Y6U7 377 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 KNTC1P50748 2209 aa12.34□□□□□ -0.43
CSRP1-203ENST00000458271 ZNF106Q9H2Y7 1883 aaKnown RBP12.33□□□□□ -0.43
CSRP1-203ENST00000458271 CHD6Q8TD26 2715 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 NTN3O00634 580 aaPredicted RBP12.33□□□□□ -0.44
CSRP1-203ENST00000458271 NUDT21O43809 227 aaKnown RBP12.33□□□□□ -0.44
CSRP1-203ENST00000458271 BRINP1O60477 761 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 USP12O75317 370 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 SLC25A14O95258 325 aaPredicted RBP12.33□□□□□ -0.44
CSRP1-203ENST00000458271 ECEL1O95672 775 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 MPOP05164 745 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 CCZ1BP86790 482 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 CCZ1P86791 482 aaPredicted RBP12.33□□□□□ -0.44
CSRP1-203ENST00000458271 OLIG2Q13516 323 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 PRPSAP1Q14558 356 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 RTP5Q14D33 572 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 ZNF648Q5T619 568 aaPredicted RBP12.33□□□□□ -0.44
CSRP1-203ENST00000458271 PDPK2PQ6A1A2 396 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 CHST15Q7LFX5 561 aaPredicted RBP12.33□□□□□ -0.44
CSRP1-203ENST00000458271 PHYKPLQ8IUZ5 450 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 CCNJLQ8IV13 435 aa12.33□□□□□ -0.44
CSRP1-203ENST00000458271 Q8N9G6 341 aaPredicted RBP12.33□□□□□ -0.44
CSRP1-203ENST00000458271 FAM71DQ8N9W8 422 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms