RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 COLEC12Q5KU26 742 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 ZBTB33Q86T24 672 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM131BQ86XD5 332 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 UBE2J2Q8N2K1 259 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 PDZD8Q8NEN9 1154 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 GFM2Q969S9 779 aaKnown RBP4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 GAD1Q99259 594 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 BARHL1Q9BZE3 327 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM206Q9H813 350 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 EFCAB1Q9HAE3 211 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 RANGRFQ9HD47 186 aaPredicted RBP4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 TBC1D13Q9NVG8 400 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 ERVK-18Q9QC07 812 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 ARVCFO00192 962 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 DVL2O14641 736 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ARPC2O15144 300 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 GPR39O43194 453 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MFSD11O43934 449 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CFDP00746 253 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PDGFRAP16234 1089 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 HOXA9P31269 272 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 NDUFA5Q16718 116 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CRY2Q49AN0 593 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SEL1L3Q68CR1 1132 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 NCBP2-AS2Q69YL0 99 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 GLYATQ6IB77 296 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 FRMPD2BQ6IN97 320 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ESRP1Q6NXG1 681 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ZFP1Q6P2D0 407 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CASC4Q6P4E1 433 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CEP68Q76N32 757 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 STRA8Q7Z7C7 330 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PCGF5Q86SE9 256 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 LINC00523Q86TU6 105 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SLCO6A1Q86UG4 719 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM126BQ8IUX1 230 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 HOMEZQ8IX15 550 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PEX5LQ8IYB4 626 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ATP6V0A1Q93050 837 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM125Q96AQ2 219 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ISG20Q96AZ6 181 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 VPS39Q96JC1 886 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MRGPRX2Q96LB1 330 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 Q96MT0 163 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CSPG4P5Q96PW8 444 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ACCSQ96QU6 501 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 OR2A14Q96R47 310 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 C11orf84Q9BUA3 381 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 C1QTNF7Q9BXJ2 289 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 DSN1Q9H410 356 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MRPL47Q9HD33 250 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 C1orf112Q9NSG2 853 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ERVK13-1Q9NX77 482 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 IP6K2Q9UHH9 426 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 NUFIP1Q9UHK0 495 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PTBP2Q9UKA9 531 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC39A10Q9ULF5 831 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TLL1O43897 1013 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PCDHGA12O60330 932 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 NDST3O95803 873 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ALDH1A1P00352 501 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MAP4P27816 1152 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 RPS9P46781 194 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 LIMK2P53671 638 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 BCAR1P56945 870 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PHC1P78364 1004 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ATP6AP1Q15904 470 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 FLYWCH1Q4VC44 716 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 XKR9Q5GH70 373 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 C6orf163Q5TEZ5 329 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 KCTD11Q693B1 232 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PM20D1Q6GTS8 502 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF773Q6PK81 442 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 STK32CQ86UX6 486 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PIM3Q86V86 326 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SAMD3Q8N6K7 520 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SH3KBP1Q96B97 665 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF669Q96BR6 464 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CCDC120Q96HB5 630 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 FERD3LQ96RJ6 166 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 IDI2Q9BXS1 227 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 GSTO2Q9H4Y5 243 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 PCDHA9Q9Y5H5 950 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MDC1Q14676 2089 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 LINC00854A0A1B0GVQ3 168 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 KDM1AO60341 852 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 IFI30P13284 250 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 RPL14P50914 215 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC12A2P55011 1212 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 RLFQ13129 1914 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC14A1Q13336 389 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 KIAA0100Q14667 2235 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 TBCELQ5QJ74 424 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 SMYD5Q6GMV2 418 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 CYS1Q717R9 158 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 RIMKLAQ8IXN7 391 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 MCUQ8NE86 351 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 OR13J1Q8NGT2 312 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 BPIFB1Q8TDL5 484 aa4.52□□□□□ -1.69
DEPDC1-202ENST00000456315 FNIP1Q8TF40 1166 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms